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SCNpilot_expt_500_bf_scaffold_33170_1

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 13 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: 3..710

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA binding protein with S1 RNA-binding domain n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X9I9_FLACA similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 235.0
  • Bit_score: 385
  • Evalue 3.30e-104
RNA-binding protein {ECO:0000313|EMBL:KFC22138.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 235.0
  • Bit_score: 397
  • Evalue 1.50e-107
putative RNA binding protein with S1 RNA-binding domain; K06959 uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 235.0
  • Bit_score: 385
  • Evalue 1.00e-104

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Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 708
GTGATTCGCTGTGTCAATTCTGTTGGCATCAACCTGAATACTGCGAGCCAATCTTTGCTGAGTTATGTTTCGGGCATTGGCGAAAAACTGGCAGAAAACATTGTAGAATACCGCACAGCCAATGGCGCATTTACAACAAGGCAGCAACTAAAAAAAGTACCACGTTTAGGAGAAAAGGCCTACCAGCAAGCGGCAGCTTTTGTTAGAATTAAAAATGCTGAAAATCCGCTTGACGATTCTGCGGTGCATCCAGAATCTTATAAAACCGTAGAGAAAATGGCTAAAGATTTAGGCCTGAAAACTGCAGAACTTATCTCTAATGCAGAAAAAATTGCACAAATTCGTCCTGAAAGATACACCACAGAGTCAATTGGAATTCTAAGCATAGAAGATATTCTGAAAGAACTGCTAAAACCTGGATTAGATCCCAGAAAGGCGGCGAAGGTTTTTGAGTTTGACCCCAATGTAAAAAATATTACCCACCTGAAGCCAGGCATGATATTACCGGGTATCGTCAACAACATAACAGCTTTTGGCTGTTTTGTGGATATTGGCATTAAAGAAAGTGGACTCGTGCATATCTCGCAGCTTAAAGAGGGCTTTGTATCGGATGTAAACGAAGTAGTAAAACTCCATCAACACGTGCAGGTAAAAGTGGTGGAAGTAGAAGAACAAAGAAAACGGATTCAGTTAACGATGATTCTTTGA
PROTEIN sequence
Length: 236
VIRCVNSVGINLNTASQSLLSYVSGIGEKLAENIVEYRTANGAFTTRQQLKKVPRLGEKAYQQAAAFVRIKNAENPLDDSAVHPESYKTVEKMAKDLGLKTAELISNAEKIAQIRPERYTTESIGILSIEDILKELLKPGLDPRKAAKVFEFDPNVKNITHLKPGMILPGIVNNITAFGCFVDIGIKESGLVHISQLKEGFVSDVNEVVKLHQHVQVKVVEVEEQRKRIQLTMIL*