ggKbase home page

SCNpilot_expt_500_bf_scaffold_23705_2

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: comp(328..1221)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 271.0
  • Bit_score: 347
  • Evalue 4.00e-93
  • rbh
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 271.0
  • Bit_score: 347
  • Evalue 1.80e-92
Diaminopimelate epimerase n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q277_RHIE6 similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 271.0
  • Bit_score: 347
  • Evalue 1.30e-92
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGACCATTTTGAACCATGCCTTTGGCGAAACGCCTGCTTCCACCGAGCGGTCCTTCGTCAAGATGCATGGCCTGCGCAATCACTTCGTCATCTTCGACCGGCGCCGGGATCGCCGTGCCTTCCGGCGCGCCGATATCGTCAGGATCTGCGATCCGCAGGTCGGCGTCGGAGGCGATCAGGTTCTGACCATCGAGCCGCCTTCACCCGAGGGCGCCGCCGCGGGCGCCACGGGGGCCATGCGCATCTTCAACATCGACGGCCGCGAAGTCTCGGCCTGCGGCAATGCCACACGTTGCGTCGCCCACCTTCTGATGGAGGAGGCCGGCGTGGACGCGCTCGTGCTCGAGACCAAGGGCGGGATGCTCAAATGCCGTCGCACCGGCGCCATGGATGTCAGCGTGGAACTTGGTCCGATCGGTTCGAACTGGCGTGACTTTCCGCTCTCGCATGAGGTCGACATGCTCGACCTGCCGGTGGCGAGCGGAGCGCTGCGACATGGCATGGGCCTGTGGATCGGCAACCCGCATGCAGTCTTCTTCGTTGACGATCTCGCCGCCGTCGACCTGGCGCGGGATGCCGCGCCAATCCACGATGACCCGCTGTTTCCGCAAGGCGTGAATGTCGGCGTCGCGGAACTGGTTGACCCCTCGACGATCCGGCTCGCCGTCTGGGAGAGGCCGGGTATCGCCACGCAAGCCTGCGGCACGGGCGCCTGCGTCGCCGCCTTCGCCGCGCGCCTGAAAGGCCTGACCGACAGCACGGGCTTCACGGTGCATCTGCCGGCCGGCCCGTTGCGGATCGAAATCCGGGGCACCATGGCCCTCATGTCGGGTCCGGTCGCCTATTGCTGCCGCGGCTTCGTCGCCGCCGAGACGGTTTACGACTTCGACTGA
PROTEIN sequence
Length: 298
MTILNHAFGETPASTERSFVKMHGLRNHFVIFDRRRDRRAFRRADIVRICDPQVGVGGDQVLTIEPPSPEGAAAGATGAMRIFNIDGREVSACGNATRCVAHLLMEEAGVDALVLETKGGMLKCRRTGAMDVSVELGPIGSNWRDFPLSHEVDMLDLPVASGALRHGMGLWIGNPHAVFFVDDLAAVDLARDAAPIHDDPLFPQGVNVGVAELVDPSTIRLAVWERPGIATQACGTGACVAAFAARLKGLTDSTGFTVHLPAGPLRIEIRGTMALMSGPVAYCCRGFVAAETVYDFD*