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SCNpilot_expt_500_bf_scaffold_21363_2

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: comp(865..1470)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 201.0
  • Bit_score: 400
  • Evalue 3.50e-109
  • rbh
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 201.0
  • Bit_score: 400
  • Evalue 1.20e-108
3-isopropylmalate dehydratase small subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THU7_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 201.0
  • Bit_score: 400
  • Evalue 1.10e-108
  • rbh

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGACAAATTCACCAAGCTCACCGGCGTCGCCGCGCCCATGCCGATCGTCAACATCGACACCGACATGATCATCCCGAAGGATTATCTGAAGACGATCAAGCGCACCGGGCTCGGCAAGGGGCTCTTCGCCGAGATGCGCTTCAAGGATGACGGCTCGGAGAATCCGGATTTCGTGCTCAACAAGCCGGCCTACCGCAACGCCCAGATCCTGGTCGCCGGCGACAATTTCGGCTGCGGCTCGAGCCGCGAGCACGCGCCGTGGGCGCTGCTCGACTTCGGCATTCGCTGCGTCATCTCGACCTCGTTCGCCGACATCTTCTACAACAACTGCTTCAAGAACGGCGTGCTGCCGATCACCGTCAGCCCGGAAGACCTGGATAAGCTGATGGACGACGCCTCGCGCGGTTCCAACGCGACGCTCTCCGTCGATCTCGAGACCAAGGAAATCCGTGGGCCCGACGGTGGCGTGGTCAAGTTCGACCTCGACGATTTCAAGCGGCATTGCCTGCTCAACGGGCTCGACGACATCGGCCTGACCATGGAGAAGGCCGGCGCCATCGCTTCCTTCGAGAAGCGCAACGCCGAGCAACGCCCCTGGGCCTGA
PROTEIN sequence
Length: 202
MDKFTKLTGVAAPMPIVNIDTDMIIPKDYLKTIKRTGLGKGLFAEMRFKDDGSENPDFVLNKPAYRNAQILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGVLPITVSPEDLDKLMDDASRGSNATLSVDLETKEIRGPDGGVVKFDLDDFKRHCLLNGLDDIGLTMEKAGAIASFEKRNAEQRPWA*