ggKbase home page

SCNpilot_expt_500_bf_scaffold_29840_1

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: comp(3..371)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFI4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 123.0
  • Bit_score: 200
  • Evalue 1.30e-48
Binding-protein dependent transport system inner membrane protein {ECO:0000313|EMBL:CDX30080.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 123.0
  • Bit_score: 205
  • Evalue 4.50e-50
binding-protein-dependent transporters inner membrane component; K02054 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 110.0
  • Bit_score: 83
  • Evalue 5.80e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGTCGGCGCTGCAACCCAGCGAACTCGACCGGCCCGCGCTGGCCCGCGGCCGGTCCGCCGCCGATGCCGACCTGGGGTCGGTGTCGGCGGCGCTCCGCCGAGCTGAGTTCGGCGATCGGCTGCGCTCGCTGGCGCTGGCGGCGCCGCTGCTCGTGCTGCTGGCGCTCAGCTTCGGCATTCCTATCGTTCTGCTGCTGTCACGCGCCGTCTATGATCCGACGATCGCCGACGCGTTGCCGCGCGCCAGCGTCGCGCTGGCCAACTGGGACGGCCAGGGCCTGCCGGGCGATGATGCCTTCGCGGCGATGGCGGCGGATCTCAGGGAGAACCAGGCCAAGGGCACGGCCTACGAGCTCGCCAAGGCCGTC
PROTEIN sequence
Length: 123
MSALQPSELDRPALARGRSAADADLGSVSAALRRAEFGDRLRSLALAAPLLVLLALSFGIPIVLLLSRAVYDPTIADALPRASVALANWDGQGLPGDDAFAAMAADLRENQAKGTAYELAKAV