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SCNpilot_expt_500_bf_scaffold_39402_2

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: comp(366..725)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribose/galactose/methyl galactoside import ATP-binding protein 1 {ECO:0000313|EMBL:EYR77887.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EYR77887.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 107.0
  • Bit_score: 124
  • Evalue 9.80e-26
Putative ribose/galactose/methyl galactoside import ATP-binding protein 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ES68_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 107.0
  • Bit_score: 124
  • Evalue 7.00e-26
rbsA; ribose transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 111.0
  • Bit_score: 117
  • Evalue 3.50e-24

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGTCCGACTTCGGCGTGGTCGCCGCCTCGCCGGAGGTGCCGATCCGAACGCTGTCCGGCGGCAACCAGCAGAAGGCGCTGATCGCCCGCTGGGACCTTGCGGACGCAGATGTGTTCATCCTGATCGAGCCGACGCGAGGCGTCGATGTCGGCGCCCGGGCCGATATTTACCGCCGCCTCGACGCGCTTGCCCGGGGCGGCAAGGCTGTGGTCATCGTGTCCAGCGACCTCCCAGAGGTGCTGACGCTGGTCGATCGTATCCTGGTCGTTCGCGACGGCGTCATCGCTGCCGAGACGACCCCGGCGGCCGTCGACGAGGAAAAGCTCAACCTGATGATCCAGGGAGCAGCGGCGGCATGA
PROTEIN sequence
Length: 120
MSDFGVVAASPEVPIRTLSGGNQQKALIARWDLADADVFILIEPTRGVDVGARADIYRRLDALARGGKAVVIVSSDLPEVLTLVDRILVVRDGVIAAETTPAAVDEEKLNLMIQGAAAA*