ggKbase home page

SCNpilot_expt_500_bf_scaffold_12731_4

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: comp(2113..2733)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein id=2476385 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 192.0
  • Bit_score: 238
  • Evalue 4.40e-60
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 189.0
  • Bit_score: 202
  • Evalue 1.40e-49
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 192.0
  • Bit_score: 239
  • Evalue 3.60e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 621
ACCGATGCCGGCATGGAAGGGCGCCTCGACGGCAATGTCGCCAAGGCGCGCGAGATGCTGAAGGAAGCCGGCTACGACGGCACGCCGATCGTGGTCCTGCATCCCACCGACCTGGCATTCCTGGCCAATCTCGCGCCGGTCGCCAAGGCCCAGCTCGAGCGGGCCGGCTTCAAGGTCGACATGCAGACGACGGACTGGCAGACCGCGGTTGCCCGCACCAACAAGCGCGATCCGTTGGCCAACGGCGGCTGGAGCGTCTTCCTCACGAGCTGGGGGGCGCTCGATTCGAACGATCCGGTGATCTCCCAGAACCTCAATGCTTCCTGCGAGAAGGCGACGCCGGGCTGGCCGTGCGACAAGAAGATCGAGGAGCTGCGCGATCAGTTCGCGGCCGCGACCGATCCGGAACAGCAGAAGAAGATCGCCGCCGAGATCCAGGTCCGGGCAGCGACGCTCGGCACGCACTATCCTCTGGGCGAGTGGTACGGCATGAGCGTCCGGCGCAGCAATGTGAAGGGCCTGATGCCGCCCATGACCGCGGCGATCTTCTGGAACGTGGAGAAGACCGGAAAGTATTCGACGGTCCCTTGCCGCAGACAATCGACGAGCGCCCGGCCTTGA
PROTEIN sequence
Length: 207
TDAGMEGRLDGNVAKAREMLKEAGYDGTPIVVLHPTDLAFLANLAPVAKAQLERAGFKVDMQTTDWQTAVARTNKRDPLANGGWSVFLTSWGALDSNDPVISQNLNASCEKATPGWPCDKKIEELRDQFAAATDPEQQKKIAAEIQVRAATLGTHYPLGEWYGMSVRRSNVKGLMPPMTAAIFWNVEKTGKYSTVPCRRQSTSARP*