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SCNpilot_expt_500_bf_scaffold_17545_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: 193..1383

Top 3 Functional Annotations

Value Algorithm Source
Response regulator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483U6_COLP3 similarity UNIREF
DB: UNIREF100
  • Identity: 33.4
  • Coverage: 347.0
  • Bit_score: 210
  • Evalue 3.20e-51
EAL domain-containing protein {ECO:0000313|EMBL:CDF82169.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.7
  • Coverage: 398.0
  • Bit_score: 212
  • Evalue 1.20e-51
response regulator similarity KEGG
DB: KEGG
  • Identity: 33.4
  • Coverage: 347.0
  • Bit_score: 210
  • Evalue 1.00e-51

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Taxonomy

Pseudomonas knackmussii → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGCCGCACAAGTTCCGCTCCCTCGTGGTCAGCGGTGATGATGAATTCAGGGCGGAGCTGGTCGAAAGGGCGATCACTCTCGATTTTTCCGCCCGCACCATCCGCTCGGCCGAGGAGCTGCCCGATTTCCTGCAGGGACGCCATTTCGACTGGCTGTTCCTCGATGTCGAGCTCGGGCGCGCGCAGTGCCTGCAAGTCATCGCTACGCTCAGTACCGGTTGGCGGCCGCGAACCGTTCTGGTCGGCTCTCTGGAGGCGGCGGACCTCGACGCCATTCGACGGAATGCCATTCGGGCGGGCCTGGATGTCGTCGGTATTCTCGCGAAGCCTCTTTCCTTGTCTGCCCTGGCGGCGCGACTGGCCGCGCTCGAGGGCCGCGACAAGCACAATCCCAATGCCGACCTCGCCGCGCGCGGCCTCGATGCGCTGCCCAACCGCGAGATCGAGGTGCACTATCAACCCATCGTTTCCATGTCGGACCGCGTGGTCCGCCGGACCGAAGCGTTGGTGCGCTGGCGGCATCCCGAGTACGGCCTGATGCAACCGGACGGGTTCATCGGTCTGGCCGAGCGGTCCGGCGCCATCATCTCCCTCACATGGGAGGTGCTGGCGCGGGCCGTCGATCAGCAGGTGACGTGGAAGAGGGAAGGGTTGTCCCTTTCGGTTTCCGTCAATGTGTCCGCACTCGTTCTCACGTCGCTGCAGACCGCCGACGACATTCTCGCCTTGCTGGAGGCAAGAGGCGCGGATCCGCGCGCGCTCATTCTTGAGCTCACGGAAACCGAACGGGCGCCCGACCCGGCGGTTGCGCGTGACCTGCTGGCGCGACTACGCGAGGCGGGTGTCGGGGTATCGATGGACGACTATGGCGTCGGCTATTCCGATTTCGGGCGACTGCAATACTATCCGTTCAGCGACCTGAAGATCGATCGCGGCCTGGTGGCCCGGCTGCCCGACGACCAGGAAGCCAGGGACATCGTCTCGATGCTCGCCTCTCTTGCGGTCCGCGAGGGAGTCGGGCTGACGGGCGAGGGCATCGAGACGCAGGAGCAGTGGGACATGCTGGAGGCGCTCGGCTGCAACTTCGCCCAGGGATTCCTGATTGCACGGCCGATGCCCGCCGATCGGGTGACGGGCTGGATCGCTGGCGTGACGAATGCCGGCCGGTACCGGGCTCCCAAAGCCGGCTAG
PROTEIN sequence
Length: 397
MPHKFRSLVVSGDDEFRAELVERAITLDFSARTIRSAEELPDFLQGRHFDWLFLDVELGRAQCLQVIATLSTGWRPRTVLVGSLEAADLDAIRRNAIRAGLDVVGILAKPLSLSALAARLAALEGRDKHNPNADLAARGLDALPNREIEVHYQPIVSMSDRVVRRTEALVRWRHPEYGLMQPDGFIGLAERSGAIISLTWEVLARAVDQQVTWKREGLSLSVSVNVSALVLTSLQTADDILALLEARGADPRALILELTETERAPDPAVARDLLARLREAGVGVSMDDYGVGYSDFGRLQYYPFSDLKIDRGLVARLPDDQEARDIVSMLASLAVREGVGLTGEGIETQEQWDMLEALGCNFAQGFLIARPMPADRVTGWIAGVTNAGRYRAPKAG*