ggKbase home page

SCNpilot_expt_500_bf_scaffold_17545_2

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: comp(1387..2007)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI00035C8756 similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 180.0
  • Bit_score: 146
  • Evalue 3.90e-32
GGDEF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 200.0
  • Bit_score: 145
  • Evalue 2.10e-32
FOG: GGDEF domain {ECO:0000313|EMBL:BAE51334.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 200.0
  • Bit_score: 145
  • Evalue 9.30e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Magnetospirillum magneticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
TTCCTCTCCGACCCGCCGGTCGGAGAGACGACGCCCTTCTACGATCCGACTCAGGGCATAACGCTGCTCGTCAATACGATCTGCGTCGTGGCGATGACGCTCGGCTTCCTGATGATGGCCAACGAGCGCCTGAGGCATCACTACGAGAAGCTCGCCAGTACCGACGAGCTGACGGACCTGCCGAACCGCCGGTTCCTCCTCGACGAAGGAGCTCGCCCGAGCGGGCCGGCCTGCGTGCTGATGATCGACCTCGACCATTTTTCCGAAGTCAACGCGACGTTCGGCCATGCCGGTGGCGACCAGGCCCTCATCGCCTTCGCTCGCCTCGCACGCCAGCAGCTTCGGCCCACGGATCTGATTGCCCGCTACGGCGGAGAAGAATTCTGCGCGCTGCTGCGCGGTGTCGAGGAGCCGGAAGCCCTGCGAATCGCCGAGCGGTTGCGCGCGGCCATTGGCGACATGTCGATCGATGTCGACGGCCGGCCGCTTCGCATCACCGTCAGCATCGGCATGGCGAAGCTTGACGGGGACCTGGGAATGGCGATGCGCAAAGCCGACGTCGCGCTCTACCGGGCCAAGGCGTTGGGCCGCAATCAGGTCCAGGGTTCGCTGGAACCGTAA
PROTEIN sequence
Length: 207
FLSDPPVGETTPFYDPTQGITLLVNTICVVAMTLGFLMMANERLRHHYEKLASTDELTDLPNRRFLLDEGARPSGPACVLMIDLDHFSEVNATFGHAGGDQALIAFARLARQQLRPTDLIARYGGEEFCALLRGVEEPEALRIAERLRAAIGDMSIDVDGRPLRITVSIGMAKLDGDLGMAMRKADVALYRAKALGRNQVQGSLEP*