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SCNpilot_expt_500_bf_scaffold_22203_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: 2..988

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9V7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 328.0
  • Bit_score: 224
  • Evalue 1.40e-55
Uncharacterized protein {ECO:0000313|EMBL:KGE00965.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 293.0
  • Bit_score: 254
  • Evalue 1.70e-64
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 271.0
  • Bit_score: 181
  • Evalue 4.20e-43

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
GGGCGATTTGCGAGGGTCGCTCGCGAGGGAAGCATTCGCAAGGCGGCACAGCAAGTCGGCATCGGTCAGCCGCAGCTCACCCGGCAACTCCGAACGATGGAGCGCGATCTCGGGGTGACCGTCTTCAGGCGTCACACGCACGGCATAACTCTCCTGGAGAAGGGGCGCACCGTACTGGCCCAGGCAGAGGCCCTGGAACGCATATGGTCGAGGCTCTCCAAGCACGCGGAACGTCGGTTTCGCGAGAGCCTTGTGGTCGCCAAATGCGGTTCGATCATTCCCTTTGGCCCGGAAAGCATCACGGCAAAGGTCCTCGCCCTCCTGGCCGCCGAATGGCACAGAAGGACGCCGGATGACCCCTTGTTTATTTCCAGCGCGATCTCCGAGGAGCTGATCGCAAGCCTGCAGAGCCGCGCTCTGGACGTCATCCTGCTCGACACGGACGCCATCCCGCCAGGGCTGCGCTATCGAACGATCGTGAAATCGCGAATGGTACTCGTCGCGGCCCCGTCTGCCGCCGCCACCAAGGCCAGCATTCGCGACCTCCTTCTCAGCACGCCGGTCGCGCTGCTCAGCCTGAAAAGCGGCCTCCGACAAAAGTTCGTGTCACTTATGGAAGCCGTTCTGTCCGAAAGCGAGCGCGAGCGGCTTTCCATCGTCGAGGCCGATTCGATGCCGGTGATCGCCAACCTGGTTCGTGACCATGGGTTCTTGACCCTGCTGCCGGAGCTTTCCCTGGGCGCCTCGGCGAGTACGTTCGATTGCACCTATGCGCCCGCGAGCTTCAGCGTGCATCTGTCTCTAGTCTGGCGCCCTGCCCCCTCTTCGGAAAAGGTGGCGAGGCGGATCTTCGACATCCTTGGCGACGCCGGGCTGCCGGGTGGCAGCCCGAGCGCGAGAGGTCGCGGTCAACAGGCGCTTTGGAAGTCAGGCCCGCTGTCGGCCCTTTCCGCCCGACGCGGAAAACTCGGTTCGAACCTGCTCTAG
PROTEIN sequence
Length: 329
GRFARVAREGSIRKAAQQVGIGQPQLTRQLRTMERDLGVTVFRRHTHGITLLEKGRTVLAQAEALERIWSRLSKHAERRFRESLVVAKCGSIIPFGPESITAKVLALLAAEWHRRTPDDPLFISSAISEELIASLQSRALDVILLDTDAIPPGLRYRTIVKSRMVLVAAPSAAATKASIRDLLLSTPVALLSLKSGLRQKFVSLMEAVLSESERERLSIVEADSMPVIANLVRDHGFLTLLPELSLGASASTFDCTYAPASFSVHLSLVWRPAPSSEKVARRIFDILGDAGLPGGSPSARGRGQQALWKSGPLSALSARRGKLGSNLL*