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SCNpilot_expt_500_bf_scaffold_25989_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: 1..471

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003726663 similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 149.0
  • Bit_score: 178
  • Evalue 4.10e-42
TetR family transcriptional regulator {ECO:0000313|EMBL:KGT74814.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 149.0
  • Bit_score: 179
  • Evalue 3.40e-42
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 152.0
  • Bit_score: 178
  • Evalue 1.30e-42

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Taxonomy

Bradyrhizobium japonicum → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GAGGTCGGCATCAGCAAGCGCACGCTCTACAACTACTACCCCTCCAAGGACGACCTTATCGTGGCCTACCTGTCGCGGCGGCTGAAGCCGGCGCCGCCGTCGGAGCGGCCGCCGCTCGACCAGATCCTGGGCAATTTCGAGCGCCTGGAGCGTACGATAAGCACCAGCGTGTTTCGCGGCTGTCCCTTCGTCAACGCGGTGGCCGAGCTCAAGGACCCCAGCCATGCCGCCACGCGCATTGCGCTCGCCTTCAAGGAGCAGCGGCGCAAGTGGTTCCAGGAGCTGCTGGAGCGGCTGGGCGTGGCCGACGCGGAGACCTTGTCGCTGCAGCTCCTGCTGCTGGTCGACGGCGCCATCGCTGCCGCGATCGTGCGCGGCGATCCCAAGGTCGCAACAGCGGCGCGCCAGGCCGCGATGGTATTGCTTCAGGCGGCCGGCGTGGAGATGCCGCGCAAGCTCAGGAAGGATTAG
PROTEIN sequence
Length: 157
EVGISKRTLYNYYPSKDDLIVAYLSRRLKPAPPSERPPLDQILGNFERLERTISTSVFRGCPFVNAVAELKDPSHAATRIALAFKEQRRKWFQELLERLGVADAETLSLQLLLLVDGAIAAAIVRGDPKVATAARQAAMVLLQAAGVEMPRKLRKD*