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SCNpilot_expt_500_bf_scaffold_25989_4

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: 1211..1375

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z48_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 54.0
  • Bit_score: 76
  • Evalue 1.30e-11
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 54.0
  • Bit_score: 76
  • Evalue 4.10e-12
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 55.0
  • Bit_score: 98
  • Evalue 2.60e-18

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATGATCGACCATGCCAGCGAGATGGCCGCCTTCGTGCGGGTCGTTGATTCCAATGGCTTTTCCGCCGCCGCGCCGGCGCTTGGCCTGTCGCCCTCGGCGGTCAGCAAGCTCGTCACGCGGCTGGAAACCCGTCTCGGCGTGCGCCTGCTGCAGCGGACGACGCGG
PROTEIN sequence
Length: 55
MIDHASEMAAFVRVVDSNGFSAAAPALGLSPSAVSKLVTRLETRLGVRLLQRTTR