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SCNpilot_expt_500_bf_scaffold_27378_2

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: 927..1313

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein IclR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRC4_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 122.0
  • Bit_score: 109
  • Evalue 3.30e-21
Transcriptional regulator {ECO:0000313|EMBL:ETR78341.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 126.0
  • Bit_score: 142
  • Evalue 3.70e-31
DNA-binding transcriptional activator MhpR; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 122.0
  • Bit_score: 109
  • Evalue 1.00e-21

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGCCGGCACCGTCATCGAAGCCGTTCGCCGCAGCTTCGCCGTCCTGGAGGCGCTCGGCCGACGGCGCAACTCGACCGTCGCGGAGCTGACTCGTGAGACCGGATTGCCGCGGCCGACCCTCATCCGGCTGCTGCACACGTTGATCGCACTGGGCTACGCGCAGCGGATTTCGCGTCAGCTTGGCTATCGGCCGGCCGATCGCGTGCTGAACCTGGCCGGTGCCATCCGTTTCGTCGACCATCTCGTGGATGCGGCGATCCCGCACATGACCCGCTTCACGCGCGAGCACGGTTGGCCGCTCTACCTCGCCACGCTGAGCCATGGTTCCATCACCGTGCGCTACTCTACGGCGCCGGAGAGTCCCATGGCCTTCGAGGGCGCCGGC
PROTEIN sequence
Length: 129
MAGTVIEAVRRSFAVLEALGRRRNSTVAELTRETGLPRPTLIRLLHTLIALGYAQRISRQLGYRPADRVLNLAGAIRFVDHLVDAAIPHMTRFTREHGWPLYLATLSHGSITVRYSTAPESPMAFEGAG