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SCNpilot_expt_500_bf_scaffold_27948_3

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: comp(1012..1287)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease (EC:2.6.1.62); K09808 lipoprotein-releasing system permease protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 91.0
  • Bit_score: 82
  • Evalue 7.30e-14
ABC-type transport system, permease component n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BR68_PUNMI similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 91.0
  • Bit_score: 82
  • Evalue 2.30e-13
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 71.0
  • Bit_score: 90
  • Evalue 1.20e-15

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
GGCCTGGTCGGCACCATAATCGGGACCGCGCTCGGTCTCCTGGTATGTGCAAGCATGCCGGCAATCATCGGGGCCCTGACCAGAATGACCAATGCCGGCGGCTCGGGGGTGAACTGGGTGGAAATAGAGTTCATCGCGTCGATGCCCGTTCGTGTCCAGGCAACCGAAGTGGTCGCCGTTGCGATCGTGGCCATCGTCCTGTCACTTGCCGCCGCGGCCTATCCGGCCTGGCGGAGCACCCGAGTCGAACCGGTCGAGGGATTGCGATATGAATGA
PROTEIN sequence
Length: 92
GLVGTIIGTALGLLVCASMPAIIGALTRMTNAGGSGVNWVEIEFIASMPVRVQATEVVAVAIVAIVLSLAAAAYPAWRSTRVEPVEGLRYE*