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SCNpilot_expt_500_bf_scaffold_21837_1

Organism: SCNpilot_BF_INOC_Chlamydiales_33_8

partial RP 7 / 55 BSCG 9 / 51 ASCG 3 / 38
Location: comp(45..1625)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 526.0
  • Bit_score: 1033
  • Evalue 0.0
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 526.0
  • Bit_score: 761
  • Evalue 2.00e-217
  • rbh
Transcription-repair-coupling factor n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MB04_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 526.0
  • Bit_score: 761
  • Evalue 6.50e-217
  • rbh

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 1581
GAGGAAGAATTTCCTTTTGTAGAAACGGAAGATCAATTAGAAGCTGTTCGCAATATCAAGCAAGATATGCAATCTGCCAAAAATATGGATCGTTTAGTTTGTGGGGATGTTGGCTATGGCAAAACGGAAGTCGCCATGCGCGCGGCTTTTAAAGCTGTCGTTGACGGGCATAAACAAGTGGCCATACTTGTGCCTACCACTGTTCTTGCCATGCAGCATTATGAAAATTTTTGTGATAGGATGGCAAACTTTCCGATTCGTATAGGGGTTTTATCCCGCTTTAGAACTTCCAAACAAACTAAAGAAACTTTAAAAGAGCTTGCGGAAGGATCGCTTGATATTATTATTGGCACACATCGTTTGATTGGTTCTGATGTTGTATTTAAAGATTTAGGTTTGATCATCATTGATGAAGAGCAAAGATTTGGAGTTAAAGCCAAGGAGCATTTAAAACAAGTTAAAATTGGCGTCGATTGCCTCACTCTTTCTGCAACCCCAATTCCTCGCACTTTATATATGTCCTTGATTGGGGCAAGAGATATGTCCGTTATAAGCACCCCTCCGCAAGATCGCCTTCCCATTACAACACTGCTAACAGACTCCAACGAACAAACCATAAAAACAGCTCTTTTAAGAGAACTTGCAAGAGATGGACAAGCCTACTTTATTCACAATAGAGTAGAAACTATTTTTGAAGTGGCTGACAAATTAAAAAAAATGCTTCCCCAAGCCAAAATTGTTGTGGCACATGGTCAAATGAGTAGTAATGAAATAGATTTGGCTTTTCACTCGTTTAAAAATGGGCAAGCTAATATTTTAGTCGCAACAACCATAGTCGAAAGTGGTATTGATATTCCAAACGCGAATACAATATTAATCGACCGCGCTGACACCTTTGGCTTAGCGGATTTATATCAATTAAGAGGAAGAGTTGGTCGCTGGATTAGAAAAGCTTATGCTTACTTTTTGGTAAAAAATTTAAGATCATTATCTGAAATGGCAAGAAAACGATTAAATGCGTTAATTGGAACTTCAGGTTATGGCGGTGGCATGAAAATTGCTATGAGAGATTTAGAAATTAGAGGTGCTGGGAATATAATAGGAACAGAACAATCAGGGCATGTATCAGAAGTTGGTTACCACTTATACTGTAAATGGCTGAAAAGAGCCATTTTGGCTTTAGAAGGGAAAATTCCAAGCACTTTAGTTGATACAAAATTAGAATTCCCCTCTATTGACTACGGAATCCCAGAAAAGTACATAAACGAAAGCAATTTACGAAAAGAAATTTACCATCGTTTGGGAGAAGCTATTGAACCGGAAGAGATCGATACTATTTGGTCAGAATTACAAGATAGATTTGGAACCCCTCCTTTACAAACCAAATGGCTTTATCATTTATCTAAAGTAAAAGTACATGCATCACGTCATGGCTTTTTACTCTTGCGACAGGATAAATTATCTCTGACTATGGAAAAGAAAAAGGGTGGAGATGTTCAAACCAAAAAAATCTTGTTAAAACCTTTCAAAACGCCTCAAGAATTAGAAGATAAACTCATGCAAGCCATGAAAAGTTTTTAG
PROTEIN sequence
Length: 527
EEEFPFVETEDQLEAVRNIKQDMQSAKNMDRLVCGDVGYGKTEVAMRAAFKAVVDGHKQVAILVPTTVLAMQHYENFCDRMANFPIRIGVLSRFRTSKQTKETLKELAEGSLDIIIGTHRLIGSDVVFKDLGLIIIDEEQRFGVKAKEHLKQVKIGVDCLTLSATPIPRTLYMSLIGARDMSVISTPPQDRLPITTLLTDSNEQTIKTALLRELARDGQAYFIHNRVETIFEVADKLKKMLPQAKIVVAHGQMSSNEIDLAFHSFKNGQANILVATTIVESGIDIPNANTILIDRADTFGLADLYQLRGRVGRWIRKAYAYFLVKNLRSLSEMARKRLNALIGTSGYGGGMKIAMRDLEIRGAGNIIGTEQSGHVSEVGYHLYCKWLKRAILALEGKIPSTLVDTKLEFPSIDYGIPEKYINESNLRKEIYHRLGEAIEPEEIDTIWSELQDRFGTPPLQTKWLYHLSKVKVHASRHGFLLLRQDKLSLTMEKKKGGDVQTKKILLKPFKTPQELEDKLMQAMKSF*