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SCNpilot_expt_500_bf_scaffold_28539_2

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 1 / 55 BSCG 4 / 51 ASCG 2 / 38
Location: 442..1131

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV7_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 229.0
  • Bit_score: 431
  • Evalue 6.70e-118
  • rbh
trbF2; conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 229.0
  • Bit_score: 431
  • Evalue 2.10e-118
  • rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AEI05266.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 229.0
  • Bit_score: 431
  • Evalue 9.40e-118

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAGCACCTTTAAACGACCCGCACCGCATTACGGCAAGACACCTCAGCCCGAGACGCCCTACCAGCGCGCGGCGCAGGTCTGGGACGATCGCATCGGCTCCGCGCGCGTACAGGCGAAGAACTGGCGCATCATGGCCTTCGGATCGCTGATCCTGTCCGCCGGTTTTGCGGCGGCGCTGGTCTGGCAGTCGGCACGCGGCATCGTCGTGCCATGGGTCGTTCAGGTCGACAATCTCGGCCAGGCGCAGGCCGTCGCGCCGGCGACGGCCGACTATCGGCCAACCGATCCACAGGTGGCCTGGCATCTGGCACGCTTCATTGAACAGGTTCGTTCGATTCCGGCCGATCCCGTCATTGTCCGGCAACAATGGCTTCGCGCCTATGAATGGACCACGGATCGCGGCGCGGCCGCGCTCAACGATTACGCGAGGTCGGACGACCCGTTCACAAAGGTCGGCAAGCAACAGGTCGCGGTCGAAGTGTCGAGCGTCATTCGCGCGTCCACGGATTCTTTCCGCGTCGCCTGGATCGAGCGGCACTACGACAACGGCCAGCTCGCCACCACCGAACGCTGGACCGCGATCCTCACCATCGTCATCCAGCCGCCGCGCGACGCCGACCGGCTCAAGGCCAATCCGCTCGGAATCTATGTCAACGCCATCAACTGGTCGCGGGAGAAGAGCCAATGA
PROTEIN sequence
Length: 230
MSTFKRPAPHYGKTPQPETPYQRAAQVWDDRIGSARVQAKNWRIMAFGSLILSAGFAAALVWQSARGIVVPWVVQVDNLGQAQAVAPATADYRPTDPQVAWHLARFIEQVRSIPADPVIVRQQWLRAYEWTTDRGAAALNDYARSDDPFTKVGKQQVAVEVSSVIRASTDSFRVAWIERHYDNGQLATTERWTAILTIVIQPPRDADRLKANPLGIYVNAINWSREKSQ*