ggKbase home page

SCNpilot_expt_500_bf_scaffold_33055_1

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 1 / 55 BSCG 4 / 51 ASCG 2 / 38
Location: comp(3..863)

Top 3 Functional Annotations

Value Algorithm Source
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 287.0
  • Bit_score: 536
  • Evalue 4.40e-150
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000255|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000255|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00159}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 287.0
  • Bit_score: 536
  • Evalue 2.00e-149
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=ISPG_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 287.0
  • Bit_score: 536
  • Evalue 1.40e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGAACAAGCTCGAAAATCCGTCGCAAATCGACGTCGCAGGCCCCAGTCCGCGGCACAGAACCACGCAGGTCATGGTCGGCAACGTCGCCGTCGGCGGCGGTGCGCCGATCGTGGTGCAGTCGATGACCAATACCGACACCGCCGATATCGAGGGCACCATCGCGCAAGTCGCCGCCCTGTCGCGCGCCGGCTCGGAAATGGTCCGCATCACGGTGGATCGCGACGAGGCCGCCGCAGCCGTGCCGCGTATCCGTGGCGGCCTGCGCAAGCGCGGCATCACCACGCCGCTGATCGGCGATTTCCATTACATCGGCCACAAACTGCTGGCCGATCATCCGGCCTGCGCCGAGGCGCTCGACAAGTACCGCATCAATCCGGGCAATGTCGGTTTCAAGGACAAGCGCGATAAGCAGTTCACCGATATCGTCGAGACCGCGATCAAATACGGCAAGGCGGTACGGATCGGCGCCAACTGGGGCTCGCTCGATCAGGAATTGCTGACGCATCTGATGGAAGAGAACGCCAAATCGGCTGCGCCGCTCGATGCCCGCGCGGTGACGCGCGAGGCGATGGTGCAGTCGGCGCTATTGTCGGCGAAGCGCGCCGAGGAGATCGGCCTGCCGAAAAACAAGATGATCCTGTCGGCGAAGGTCTCGGCGGTGCAGGATCTGATCGCCGTCTACCAGACGCTGACGGAACGCTCCGACTATGCGATCCACCTCGGCCTCACCGAGGCCGGCATGGGATCGAAGGGCATCGTCGCCTCAAGCGCCGCGCTCGGAATCCTGTTGCAGCAGGGCATCGGCGACACCATCCGCATTTCGCTGACGCCTGAGCCCGGCGGCGACCGCACGCTGGAG
PROTEIN sequence
Length: 287
MNKLENPSQIDVAGPSPRHRTTQVMVGNVAVGGGAPIVVQSMTNTDTADIEGTIAQVAALSRAGSEMVRITVDRDEAAAAVPRIRGGLRKRGITTPLIGDFHYIGHKLLADHPACAEALDKYRINPGNVGFKDKRDKQFTDIVETAIKYGKAVRIGANWGSLDQELLTHLMEENAKSAAPLDARAVTREAMVQSALLSAKRAEEIGLPKNKMILSAKVSAVQDLIAVYQTLTERSDYAIHLGLTEAGMGSKGIVASSAALGILLQQGIGDTIRISLTPEPGGDRTLE