ggKbase home page

SCNpilot_expt_500_bf_scaffold_88_22

Organism: SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: 19161..19916

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FDC2_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 250.0
  • Bit_score: 258
  • Evalue 8.50e-66
Contig_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25246.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 241.0
  • Bit_score: 260
  • Evalue 3.10e-66
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 250.0
  • Bit_score: 258
  • Evalue 2.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. MEB061 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 756
ATGAAACAGAGAGATATTTATACGCTTGCCTTGTCAGATAAAGTAATATTGGTAACAGGGGGCACAACAGGAATAGGAAGAGCTACAGCCCATCTTTTGGCATCATTGGGAGCCAGGGTATTCATTACCGGACGCCATCAGGAACAATTAGAAGAAACATTGCGTGACGGTAAGACCATTTATCCGGATGCCATGTTATCGGGTATTGTTTCAGATTTGTCTTCTGAGGAAGGAATCGAAAAAGTATTCCAGGCAATGGAATCTGAATTTGGTGCTATTGACATATTGGTCAACAATGCAGCTTTGTCTGCCAACAGTGCTGCTGAAGGCAATTATAAAGAATGGAGCTATATTCTCAATACCAATCTTTTAGGATATATAGCTTGTGCCAATGCGGCAATCAGCAGAATGAAAACAAAAAAGGGAGGACAAATTGTTAATGTCGGGTCTATGAGTGCCGAAATTCGGGAAACCGGTAGCAGCGTGTATGTGGCAACCAAATCAGGAATACAGGGGTTTACTGCCGCATTGCGCAAAGAACTCAATCCGGACCAGATCAAGGTTACGCTGATAGAACCCGGAGCCGTAAATACAGATATGCAACCCGGAAGCGGTGAAGAACGCCAGGAGAAAGTCGATGCTATGGAAATGCTTGATGCCTGTGATATTGCAGAAGCTATTGCTTTTTGCCTTTCGCGTCCCAGTCATTGTGATATAGTAAGCATGCAGATTCGTCCGCTTAAACAAATTATATAA
PROTEIN sequence
Length: 252
MKQRDIYTLALSDKVILVTGGTTGIGRATAHLLASLGARVFITGRHQEQLEETLRDGKTIYPDAMLSGIVSDLSSEEGIEKVFQAMESEFGAIDILVNNAALSANSAAEGNYKEWSYILNTNLLGYIACANAAISRMKTKKGGQIVNVGSMSAEIRETGSSVYVATKSGIQGFTAALRKELNPDQIKVTLIEPGAVNTDMQPGSGEERQEKVDAMEMLDACDIAEAIAFCLSRPSHCDIVSMQIRPLKQII*