ggKbase home page

SCNpilot_expt_500_bf_scaffold_161_14

Organism: SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: 14399..16489

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4F688 similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 697.0
  • Bit_score: 785
  • Evalue 3.20e-224
  • rbh
TonB-dependent receptor {ECO:0000313|EMBL:KIX22931.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 703.0
  • Bit_score: 751
  • Evalue 1.20e-213
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 704.0
  • Bit_score: 730
  • Evalue 5.10e-208
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. 316 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2091
ATGAAAATTAGGTTAGTAGTACTGACCGTACTATTGGCAAGTTATCCTTCTTTTGCCCAGAAAACAGAAAACGACACCTTGAATCAAATGGAAGAAGTTGTCATTGAAGGAAACACGAAAACATTTATTTATAAAAACGGAAATGTTAAGATTGATATCGCAAATTCAATTCACAAAACCGTTTCCAATACTTTAGACCTTTTGTCGAGGCTCCCCAAAATCCAAATAAGCCCGGATAGGGAAAAAATTACGGTTATAGGAAAAGGAACGCCATTAGTGTATATAGACAATCAGAAAGTTGAAATGAACGACCTGAATGCGCTATCGGTTGAGGACATCAAAACAATAGAAATCATTGATAATCCGTCGTCAAAATATGAAGCCGAAGGCAGGTCTGTCATATTGATTACCAGAAAAAGAAACAAAAAAGAAGGTTACCAACTGACTTTTTTAGAAACTGCTGCTTTTAAAAAGAAATTCAATAATTATCTCGGAATGAATTCAAGCTTCAAATTAAGTAAAACAGAATTTAAGGCAAACTTCAATTACAACAGGTTAAATCCTTGGGAAAGTAACGGAAGTGACTATAAGATTCCGGCAAACAATATCCAATCTGATTACCGGGTTGCAGGCTATACGAACAGAAATAAATACGTTTATGGCGTGGGTGTCTATCATAAGATTAATGAAGAAGAAGATTTTTCATTTACCGCAAACGGAACCTCCAAAAATGATGATTTTGACTTTTCTACCAAAACAAACAGCAAAATTGGAGAAGAACAAAATCGTATACGGACTTTAGGGAAAAGTAAAGAATATGAAAATTTTATCAATTCATTTTTAAATTATAATAAAAAAATAACCAGTTGGGAAGCGTCTCTTTTTGCAGGATTGCAGTATTCTAACTACAATTCGGAATCGTTTACAAGTGCTTTGAACAATTACAATGAAACAAGCTACGAGCCTTTCCAACAGACCCAGGATGGTTTCAATGTAAATGTCTTTTCAGGAAGGATTGATTTTGAAAAGAAATTTAAAAATGAAATAAAGTGGGAGACAGGAGCCCAATATTCTTCAGCTATTGCCCATACAGATTTAGATATTAAAAATTTTGAGCAGGATTTGGCTTCCAATTCAAAGTACCAACTCAAAGAAAAAAATACGGCGGCCTATGCTCAATTATCAGGAACACTTATGAAGATTTCCTGGATGGCAGGTGTCAGGGCAGAAAACACAAAAATCTTCGGACGTTATGAGGGAGAGCCGGTTTCAGTTGATAAGAACTATACTACTTTATTTCCAAAAGCGCAGCTAAGTATACCTATTGACAGTACAAAAACGCTGAACCTGAATTATGGAAGAAGTATTTCCAGGCCGGATTATTCATCTACAAGCCAGGGCCTTACTTATATCAATCCGTATTTTGCCTTCGCTACCAATATCAACTTAAATCCATCTATTACGAGTGAAATAGTAGCTACTTTGCAGTATAGGGACAAATCTGTAAAGTTGAGCTACTACGAAAATAGTAACGTAATAAACTATGGTTTTTTATATAATGAACCGCAGAACTTATTGATTTACAGACCGCAAAATTTTGAAAAAGAAACAGGATATAATCTGGAATTTATGTTGCCTTTTAGCAGCAATTTCTGGTCTTCGACTAACATTGTCAGTTTTATTTTAAATAAGATTGAAGATTCTTCTGCAGTAATTGGAGATACTAAACCGTATGCCTATTATTATTCCAATCATGTTTTTAAATTAAAAAATGAATTGCAGTTTTCCTTAACGGGCTGGGGACTCACGAGCAGAAATGAAGGAGTTTTTCAAAGAAACTCTTATTTCCAATTGGATTTAGCGGCTTCAAAGACTTTTTTTAAAAACCTTTCCTGTACGCTTAATTACAATAATGTATTTAGGAACAGAACGTTTACAGAAAATTTTGAAGTCAGTAAAGTACGTTCCAACGCTATATTTTTTGTAGATAATTGCGAATTTTCAATAGCAATCCGATATACTTTAGGAAAAATAAAAGACTCTATTTATAAAGAAAAAGAAGTAAACGAAAATTCAGGAAGGATAAAATAA
PROTEIN sequence
Length: 697
MKIRLVVLTVLLASYPSFAQKTENDTLNQMEEVVIEGNTKTFIYKNGNVKIDIANSIHKTVSNTLDLLSRLPKIQISPDREKITVIGKGTPLVYIDNQKVEMNDLNALSVEDIKTIEIIDNPSSKYEAEGRSVILITRKRNKKEGYQLTFLETAAFKKKFNNYLGMNSSFKLSKTEFKANFNYNRLNPWESNGSDYKIPANNIQSDYRVAGYTNRNKYVYGVGVYHKINEEEDFSFTANGTSKNDDFDFSTKTNSKIGEEQNRIRTLGKSKEYENFINSFLNYNKKITSWEASLFAGLQYSNYNSESFTSALNNYNETSYEPFQQTQDGFNVNVFSGRIDFEKKFKNEIKWETGAQYSSAIAHTDLDIKNFEQDLASNSKYQLKEKNTAAYAQLSGTLMKISWMAGVRAENTKIFGRYEGEPVSVDKNYTTLFPKAQLSIPIDSTKTLNLNYGRSISRPDYSSTSQGLTYINPYFAFATNINLNPSITSEIVATLQYRDKSVKLSYYENSNVINYGFLYNEPQNLLIYRPQNFEKETGYNLEFMLPFSSNFWSSTNIVSFILNKIEDSSAVIGDTKPYAYYYSNHVFKLKNELQFSLTGWGLTSRNEGVFQRNSYFQLDLAASKTFFKNLSCTLNYNNVFRNRTFTENFEVSKVRSNAIFFVDNCEFSIAIRYTLGKIKDSIYKEKEVNENSGRIK*