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SCNpilot_expt_500_bf_scaffold_161_20

Organism: SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: comp(21117..21779)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine synthase n=1 Tax=Flavobacterium sp. CF136 RepID=J2SI98_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 219.0
  • Bit_score: 295
  • Evalue 4.20e-77
Spermidine synthase {ECO:0000313|EMBL:EJL65187.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 219.0
  • Bit_score: 295
  • Evalue 5.90e-77
spermine synthase similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 219.0
  • Bit_score: 285
  • Evalue 1.80e-74

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Taxonomy

Flavobacterium sp. CF136 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 663
GTGCTAAAAAAAATACTAAGCTACCTCCTGCCCATAAATGTTTACAAGCAGCATTCACCCGTGAGTAAAAACCTGGAAGTCACCTGGGCCAATGGTGAATTGGTATTGGATTCTAAAAACACCAATTATTCTTATGGAAGCCTGCAGCGTATTCTTAGAATAGGATTGGAAAGCATAGGTTTTGAGACTGTATTAAAAGCGGAACACATTCTTGTTCTTGGAGTTGCTGGCGGAAGCGTAATTAAAACTTTAAGTGAAGAAATTGGATTTAAAGGCAGGATTACGGGAGTAGAAATCGATTCTGAAGTACTGCAAATCGCCAATTCCTATTTTGGATTGGACAAAATCCCGAATTTAGAAATCATTGTTGATGATGCTTCTAAATATGTTTTAAAAGACAAAAACAAATACGGACTTATTATTGTTGATATTTTTCAGGATACTACAATGCCGGACTTTCTTTTTGAAGATTCTTTTCAGAAACAAATCTGTGAACTTTTAGACAAAAAGGGAATTATTCTTTTTAATACGATGTGTCTTACTGATAAAGACAGGCTGCGTAACAAAGAGTATCTGTCCAACATCAATTCGGAATTCTATACTTTACGAACTATCCCAAGAATTGAGCGTTATAACGAACTCATTATAATAGAAAAGAAATAA
PROTEIN sequence
Length: 221
VLKKILSYLLPINVYKQHSPVSKNLEVTWANGELVLDSKNTNYSYGSLQRILRIGLESIGFETVLKAEHILVLGVAGGSVIKTLSEEIGFKGRITGVEIDSEVLQIANSYFGLDKIPNLEIIVDDASKYVLKDKNKYGLIIVDIFQDTTMPDFLFEDSFQKQICELLDKKGIILFNTMCLTDKDRLRNKEYLSNINSEFYTLRTIPRIERYNELIIIEKK*