ggKbase home page

SCNpilot_cont_1000_bf_scaffold_213_20

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(25625..26020)

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 134.0
  • Bit_score: 217
  • Evalue 2.10e-54
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 134.0
  • Bit_score: 217
  • Evalue 9.40e-54
DNA-directed RNA polymerase subunit omega n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X0I0_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 134.0
  • Bit_score: 217
  • Evalue 6.70e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGCCCGCGTTACCGTTGAAGACTGCATCGACAAGGTCGATAACCGCTTTGAACTGGTCCTGCTCGCCGGTCACCGCGCGCGTCTACTCTCGCAGGGCGCGCCGCTGACCATCGATCGTGACAACGACAAGAACCCGGTCGTCGCATTGCGCGAAATCGCAGACGAGACATTGTCGCCAGGCGACCTCAAGGAAGATTTGATCCACTCGCTGCAGAAGCATGTCGAGATCGACGAGCCGGAGAGCGATGCGGCAGAGATCGTGGACCAGTCGGAAGTCGCTGTGGGCGAGGCCCAGAATGAAGAAGAAGGCATCGCTTTCGACCGCATGTCGGAAGAGGAACTCCTTGCCGGCATCGAAGGCCTCGTGCCGCCGGAAAAGAGCGACGATTTCTGA
PROTEIN sequence
Length: 132
MARVTVEDCIDKVDNRFELVLLAGHRARLLSQGAPLTIDRDNDKNPVVALREIADETLSPGDLKEDLIHSLQKHVEIDEPESDAAEIVDQSEVAVGEAQNEEEGIAFDRMSEEELLAGIEGLVPPEKSDDF*