ggKbase home page

SCNpilot_cont_1000_bf_scaffold_278_20

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 18735..19769

Top 3 Functional Annotations

Value Algorithm Source
Twin-arginine translocation pathway signal n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3IZ84_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 345.0
  • Bit_score: 205
  • Evalue 6.90e-50
Uncharacterized protein {ECO:0000313|EMBL:KAJ32577.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 336.0
  • Bit_score: 390
  • Evalue 2.10e-105
family 1 extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 349.0
  • Bit_score: 195
  • Evalue 2.20e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAGGATGCTTTCCCGCGCGCTCGCCGCGCTTAGTGCGACAGTTCTGATCGGCGCTTCGACGCTGACGTCTGGCGCGACAGATCAGAAGCCCGAAAAGATCGTCGTCACGGCGTATGGCGGTATCTGGGCCGAGTCCGTGAAGAAGAATTACGTTCCGTGTTTCGAGAAGAAGACGGGTGTCAAAGTCGAGATCCTGACCGGCGAATCGTCCGATTGGCTCAACAAGGTGAAGGCGAATCCCGGAAATTCGCCAATCGACGTTATTACCCTCAGCGAGCTTGATAGCCTTCGCGCGGCCAATGACGGCCTCCTCGAGCAATTGAGCGTCGAAAAAGTGCCAAATCTTGCGAATATACCGGACGCCTTCCACAAGCCGTGGGATGACTACGGAGTGTCCGGGAACTACGGCGCCCTGGGTGTCATGTATAATGGCGACAAGGTCTCGAAACCGACATCCTGGAAGCAGCTCATAGACGATATCGCAGCAGGGAAATACGGCAAGAAGGTCGCGTGGCCGTCCGGCACCTACACCTGGGGACCGTCGCAGATGTGGTGGGTGGCGCAACAATACGGAGGGGACATGAATGTCGCCTTCGAGAAGATGAAGGCAATCCAGCCCTATGTCGTGAAATTCTGGACTACGCCGGTCGAAGCGCTGAACCTGTTCGCCACCGGCGAGGTCAATGTGCTTGTCTATTGGGACGGTCGTGCCTTCGCCTTCATCAATAAGGGCAACGACTGGGCCAAGTTCACGGTCCCGGAACCCGGCGGCGTCGTCAGCTTGGTCATGCAGTCGGTGGTGAAGGGCGCGAACCCGATTGCCTACGAGTACATTAACTGCGTGCTGTCTTCCGAAGGCCAGATCGGCAACTCGATGACCATGCGTTATCCCGGCACCAGCACCGCCGTGACCTATCCGGAGGAGCTCCGCGCGGAGTTTACGCCGATCGAAAAGGTGAAAGTACCGCCGTACAAGGAAATCATCGACCAGATTCCTGAGTGGGTCGAACGGTGGAATAAGGAAATGCGATAG
PROTEIN sequence
Length: 345
MRMLSRALAALSATVLIGASTLTSGATDQKPEKIVVTAYGGIWAESVKKNYVPCFEKKTGVKVEILTGESSDWLNKVKANPGNSPIDVITLSELDSLRAANDGLLEQLSVEKVPNLANIPDAFHKPWDDYGVSGNYGALGVMYNGDKVSKPTSWKQLIDDIAAGKYGKKVAWPSGTYTWGPSQMWWVAQQYGGDMNVAFEKMKAIQPYVVKFWTTPVEALNLFATGEVNVLVYWDGRAFAFINKGNDWAKFTVPEPGGVVSLVMQSVVKGANPIAYEYINCVLSSEGQIGNSMTMRYPGTSTAVTYPEELRAEFTPIEKVKVPPYKEIIDQIPEWVERWNKEMR*