ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1182_16

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 19041..20240

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D5ADEF similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 395.0
  • Bit_score: 433
  • Evalue 3.10e-118
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS36605.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 393.0
  • Bit_score: 417
  • Evalue 2.40e-113
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 382.0
  • Bit_score: 255
  • Evalue 3.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGACACGCTCCTTCGCCAGACTGTTGCGTTTCGAACGCCCGTCGGACGCGGTTTACGTCGAGCTGGTCGACGCGCTGTTCAGTCTTGTGCCGCCGATGGTCTTTCTGGCGATCTCGATCGGTGTGGTCGGCGCAGCGATCTTCGCCCGCACCGGCGACTGGCTGGTGATCGGATCAACCGCCGCGATTCTCGTGGTCACCGCCGAACGCATCCTGATGGCACTGCGCTATCGCCGGGCCCGCGAAGCAGGCCCATTGTCGTTCGCCGCCGCACGCAGTTGGGAAAAACGGTTCGCGGCGCGACGCTTCATCACGACGTCGATTCTCGGCATCATGGGCGCACGGTGCTTCATGCTCCCCAACCCCAACGTTCACATGCTGATGGTCGGAATGCTGGTTGCCTATGGCGCGGGCACGGTGACGCGCGTGGCCTATCGGCCGCGCCTCGCGATCATCAACCTGTTGATCGTGTCAGTGCCGTCCATTGCCGCATGTCTGTATATCGGTGGCACGGCCTACTGGTGCCTCGCCTTTATCATGGCGATTTTTCTGGTGGGGTCGTTCGAGACCGTGCAGCATCTCTACGCAGCCATCGTCAGCCAACTCACGCTCAAGCTGCGCTTCGCTGGCCTCGCGCGTCGCGACGCGCTGACCGGCCTGTCCAATCGTCTGGCTCTGAACGAAAATCTGGAGGCGATCGTTGCCGCGGCTTTGCGACAGGGCCGTCCGATCGCGATCCACAGTCTCGATCTCAACAACTTCAAGCAAGCGAACGACCGCTTCGGGCATCCCGTCGGGGACGCGGTCCTGCGCGAGGTCGCCAAGCGGCTGTCGTGGCTGACGCGCGAAAACGATCTGCTGGTCCGACTGGGCGGCGACGAATTCGTGCTGGTGCAGGCCGACTTGACATCCCGCGAGCAGGCATTAGCGCTGGCGACACGCATCGTTCGGGAAATCGCCACCACCTACCAGATCAACGGGCACGCGATTCAACTCGGCACCAGCGTCGGCATCGCCATGATGACACCGGACCAGCCGGTGAGCGCTGAGGACCTGCTCAACCGCGCCGATCAAGCGCTGTATCAGGCGAAGCGCACCAGCAGCGGCTTCGTCGTTCATGCGATGACACCGCAACTGGTGCCGCCGCTTCCCGACGGTGGCGAGATCGCGGACGCGCGAAAGATCGTCAATTCAAACTGA
PROTEIN sequence
Length: 400
MTRSFARLLRFERPSDAVYVELVDALFSLVPPMVFLAISIGVVGAAIFARTGDWLVIGSTAAILVVTAERILMALRYRRAREAGPLSFAAARSWEKRFAARRFITTSILGIMGARCFMLPNPNVHMLMVGMLVAYGAGTVTRVAYRPRLAIINLLIVSVPSIAACLYIGGTAYWCLAFIMAIFLVGSFETVQHLYAAIVSQLTLKLRFAGLARRDALTGLSNRLALNENLEAIVAAALRQGRPIAIHSLDLNNFKQANDRFGHPVGDAVLREVAKRLSWLTRENDLLVRLGGDEFVLVQADLTSREQALALATRIVREIATTYQINGHAIQLGTSVGIAMMTPDQPVSAEDLLNRADQALYQAKRTSSGFVVHAMTPQLVPPLPDGGEIADARKIVNSN*