ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1446_1

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(1..198)

Top 3 Functional Annotations

Value Algorithm Source
Porin n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QF48_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 62.0
  • Bit_score: 99
  • Evalue 1.00e-18
porin similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 62.0
  • Bit_score: 99
  • Evalue 3.20e-19
Porin {ECO:0000313|EMBL:ACE99482.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 62.0
  • Bit_score: 99
  • Evalue 1.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
ATGAAATCCTTCCTTCTGGGTACGGTCGCCCTCGCAGCAGTCGGTCTGGCGCTTCCCGCGAATGCCGCCGACCTCGCCGCGCGTCCCTACACGAAGGCTCCCGCTTACGTTCCGCCTCAGATCTACAACTGGACCGGCTTCTATCTCGGTGGTCACGTCGGCGGCGCGTTCCGCGGCGACAGCAACAACCTGCTGGGC
PROTEIN sequence
Length: 66
MKSFLLGTVALAAVGLALPANAADLAARPYTKAPAYVPPQIYNWTGFYLGGHVGGAFRGDSNNLLG