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SCNpilot_cont_1000_bf_scaffold_24636_1

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(3..1085)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: regulator of nonsense transcripts 1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBD45 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 355.0
  • Bit_score: 614
  • Evalue 8.80e-173
  • rbh
Upf1; UPF1 regulator of nonsense transcripts homolog (yeast) similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 355.0
  • Bit_score: 606
  • Evalue 7.50e-171
  • rbh
Regulator of nonsense transcripts 1 {ECO:0000313|EMBL:EGV97429.1}; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Cricetidae; Cricetinae; Cricetulus.;" source="Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 355.0
  • Bit_score: 606
  • Evalue 2.60e-170

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Taxonomy

Cricetulus griseus → Cricetulus → Rodentia → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 1083
GTGAATTTTTGGAGTTTAGATTACGGTGAAGAGGTGGGAATTGAATTGAAGATTAGTTCAGGTGCGCCGGTTGAACATAGTTCGAATTTTGTTGTCGAATTCGTTTGGAAATCGACGTCATTCGATCGAATGCAATCAGCGTTGAAAACGTTCGCCGTCGATGAGAATAGCGTGTCGGCGTATCTCTATCATCGTCTTCTCGGACATGAAGTCGAAGATTTAGTGATGAAAGTCAATCTGCCCAAGCGTTTTTCCGCGCCCGGCCTGCCCGAACTCAATCATTCGCAAGTCTATGCAGTTAAAACCGTTCTTCAACGTCCGTTGAGTCTAATTCAAGGTCCGCCAGGCACGGGCAAAACTGTAACATCAGCGACGATTGTCTATCATCTTGTCAAACAGAATCAAGGTCAAGTTCTCGTTTGTGCGCCGAGTAACATTGCCGTCGATCAACTAACCGAAAAAATTCACAAGACCGGGTTGAAAGTCGTTCGTCTCTGTGCGAAGAGTCGCGAAGCTCTCGATTCGCCGGTGTCATTTCTCGCGCTTCACAATCAAATTCGAAATCTCGAGAGCGAACCCGAACTCAAAAAACTCCAACAACTCAAAGACGAAACCGGCGAACTCTCATCGGCCGATGAGAAACGCTACCGAACGTTGAAACGAAAGTGCGAGACCGATCTTCTGCGAAATGCCGACGTCATTTGTTGCACGTGCGTGGGCTCGGGCGATCCGCGTCTCTCGCACGGCTATCAGTTTCGGTCGATTCTCATCGACGAATCGACGCAGGCCACCGAGCCCGAATGCATGGTGCCGGTGGTGCTCGGCGCTCGGCAGCTGATTCTCGTCGGTGATCATTGTCAGCTGGGCCCGGTGGTGATGAGTAAAAAAGCGGCCAAAGCCGGCCTTAGTCAGTCGCTGTTCGAGCGTTTAGTCGTGCTCGGCATTCGGCCGATTCGTCTTCAAGTTCAGTATCGAATGCATCCGGCATTGTCCGCCTTTCCGTCGAATATTTTCTACGAAGGTTCGCTGCAAAATGGTGTCACAGCCGCCGAACGAGCCATCAAAGGACTCGATTTTCCGTGG
PROTEIN sequence
Length: 361
VNFWSLDYGEEVGIELKISSGAPVEHSSNFVVEFVWKSTSFDRMQSALKTFAVDENSVSAYLYHRLLGHEVEDLVMKVNLPKRFSAPGLPELNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLVKQNQGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSREALDSPVSFLALHNQIRNLESEPELKKLQQLKDETGELSSADEKRYRTLKRKCETDLLRNADVICCTCVGSGDPRLSHGYQFRSILIDESTQATEPECMVPVVLGARQLILVGDHCQLGPVVMSKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERAIKGLDFPW