ggKbase home page

SCNpilot_cont_1000_p_scaffold_1432_7

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(9296..10519)

Top 3 Functional Annotations

Value Algorithm Source
OmpA n=1 Tax=Rhodococcus sp. NS1 RepID=Q06G95_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 419.0
  • Bit_score: 196
  • Evalue 3.80e-47
OmpA {ECO:0000313|EMBL:ABI79416.1}; TaxID=402236 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 419.0
  • Bit_score: 196
  • Evalue 5.30e-47
OmpA/MotB family outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 82.0
  • Bit_score: 60
  • Evalue 1.30e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus sp. NS1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
GTGTCCCTCACCCTTCCCGGCCTGCGCTCAGCCACTGCCGTCGCCCTCGTCGCCATGTTCGGGCTCGTCGCCTGCGGCTCGTCCGGCGGCGACGACGCAGCAGGCGCGACGTCGGCCACCCCCGAGCCCGTCGTGACGTGCACGGCGCCTGCCGGGGGCCTCGTGCTCGCCGTCGGCGTGCACGCCAACGCCCCGGCGCCCGACGTTCCCGCCGGCGTGGGATGCCTGATCGAGACCGCCGTACGCGGCCACCTGCCGATCAGCGTGGTCGGCATCGACGGCACCCCGGCCGTCGACCCAGCGGTCAGCGCGCGCACGTTCACGGTGCGCACCGCGAACCCCGGCGCCACCAGACAGGACGTCGACTCCGGCATTGCCACAGTGGTGAACGCGGTGCGCGGGTTGAAGGCCGACAGCGACGGCTCGGACGTCGTCGCCGCGTTCGGGCTCGCGCACGACCTGGCCGTCTCGGGCTCGGGCGGGCGCGCGACGGTGGTGGTGCTCGACCCGCTGCTGCCCGACCGCGGCGCGCTGCGCCTCACCGAGCCCGGCTGGGCCGAGGCCGACCCCGCCGGGGCCGCCGACACCCTCGACCGCGGCCACCGTCTCCCGCCGGGCGACGGGCTGGACTACCGGCTCGTCGGCGTCGGGTACACGGCACCGCCGCAAGAGCCGCTGCCGACCGCGCTGCGGCAGAACGTCACCGCGATCTGGACGGCTGTGCTCACGCGCGGCGGAGCCCACGTGGTCGCCGACCCGACGCCACGGCAGGGTCCCGCGCCGCGCACCAGTTTCACGACGGAGACCGTAGCGGTGCCTGCGGTGCCGCAGCCGTCGCTCTGCCCGGGCGTCCCGATCGTCTACGACAACACTTCGGCGCTCGGCTTCCGGCCCGACTCCGAGGCGCTCGTCGACCCGGACGATGCCGCTCACGCACTGGACGGGGTCGCCGCGTGGCTGCGCGCCGACCCGGCAAGGCAGGCCGCCGTCCTCGGCACGACCGCCCGCATCGGCGACGAGACCGGGCAGCTCGACCTGAGCAGGCGCCGTGCGGCAGCAGTCCGGAGGGTCCTGCTAGACCTCGGCGCGGCCGCGGACCAGGTCGTCGCCGACGGCGTCGGCAGCCGGTTCTCGGCCTACATCCCCGACGCTGACGACCCGATCGCACGTCAGCACAACCGCAGCGTCCGGATCACACTTTCGGGTCCGGCCGACCCCTGCTGA
PROTEIN sequence
Length: 408
VSLTLPGLRSATAVALVAMFGLVACGSSGGDDAAGATSATPEPVVTCTAPAGGLVLAVGVHANAPAPDVPAGVGCLIETAVRGHLPISVVGIDGTPAVDPAVSARTFTVRTANPGATRQDVDSGIATVVNAVRGLKADSDGSDVVAAFGLAHDLAVSGSGGRATVVVLDPLLPDRGALRLTEPGWAEADPAGAADTLDRGHRLPPGDGLDYRLVGVGYTAPPQEPLPTALRQNVTAIWTAVLTRGGAHVVADPTPRQGPAPRTSFTTETVAVPAVPQPSLCPGVPIVYDNTSALGFRPDSEALVDPDDAAHALDGVAAWLRADPARQAAVLGTTARIGDETGQLDLSRRRAAAVRRVLLDLGAAADQVVADGVGSRFSAYIPDADDPIARQHNRSVRITLSGPADPC*