ggKbase home page

SCNpilot_cont_1000_p_scaffold_893_6

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(3272..5206)

Top 3 Functional Annotations

Value Algorithm Source
Predicted secretion system X protein GspD-like n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPT8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 650.0
  • Bit_score: 1005
  • Evalue 1.80e-290
  • rbh
Type II and III secretion system protein {ECO:0000313|EMBL:KIO50364.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 658.0
  • Bit_score: 1011
  • Evalue 6.20e-292
type II and III secretion system protein; K02453 general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 615.0
  • Bit_score: 723
  • Evalue 5.80e-206
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1935
ATGAATGTGGGTCAGTATGGCTCTGGTCTGGCTACCTGCCTCTCCTGCATCCCGGTATTTATGATATCCGCTTGCGCCTTCGCCCCCTGGCAAAAGGACGGGGTGCCGGGAGATACGCCGGAAGAACGGATCGCAACTGCGCAAGCAGCCCAACGGGCCAAGCCGGAGGATATGCCCACGCGCCGGGATCTTCATGTCACCCATGAACGGGCCATCTACGAATTGCAGCAGGAAGCCGATATTGCACGCCGCGAAGGTCGAATTGCGGATGCCGAGGCACTGTTTGCGCGCCTTAAGGGAATCGATCCCGCCAACCAACGCGCCGCCGCAGGCTTGCATGCGATAGCCAATGAGCGGAAGCATGCCACCACGGTGGAAGAAGTCTACGCTTTGCTTGGCGAGGGAAACCTCGATGCCGCGCAGGCCCGTTTGCGCGCAGTGCTTCTGGAAGCGCCATCCCATGCGGGGGCTCTGGAATTACAGGCCGAAATCCGCCGGAAACGGAATTTCGCGCGTAACGAGCCTCCCCGCCTCAGGTCTCCCTTCGACGCACCGGTTTCGCTGGAACTGCGCGACGCCAATATCAAAATGGTATTCGAAGCACTTTCGCGTACGACCGGGATCAACTTCATTCTCGACAAGGATATCAAACAGGATGCCAAGGCGACGGTTTTCATTTCGCAGTCCCGCATCGAGGACGCCATAGACATGGTATTGGCCACGAACGGCCTGCAAAAAAAAGCGCTGTCGGAAACAACGGCGCTGGTATTTCCCAATACGTTGCAAAAACTCAAGGACTACCAGGACCTGATGATCCGCAGTTTTTTTCTGATCAATGCCAATGCCAAGCAGATGGCCTCCCTGCTGAAGACCATGCTCAAGAGCAAGGATGTGCATATAGACGAGCGCCTCAACATGCTGGTCATACGCGATACACCTGAGGTGATCCGCATAGCGGAGAAACTCGTCGCCATCAATGATATGGCCGATCCGGAAGTCATGCTGGAGATGGATGTACTGGAAATAAGCCGCAGCCGCTTGCAGGAGCTGGGAATCGAATATCCGACCACGATAACCAGCGCAGCGGGGCTGACGCTGCAGGCGCTGAGCTCCAACCTGATCTCTTCTCCGCTCGACTTTCTCAATATCAACAGCAATCCTGCCGCCAACTTCAAAAAAACCATCAGCGATATCAATGTGCTTTCCAATCCCCGCGTCCGCGTGCGCAACAACGAGAAGGCGAGGGTGCAGGTAGGCAACAAGGTGCCGCTGATCACCACGAATGTGGCCGGCACCACCGGCACCTCGTCCGAGAGCGTGCAATACATCGACGTGGGACTCAAGCTTGAAGTGGAGCCGCGCATCGCCCTCGATAGCCACGTCCATATCAAGGTGGCGCTGGAAGTCAGTTCGCTGGGAATATCGACGACGTTGACGAATGGCTCCCAGGTTTTCCAGATCGGCACCCGTAACGCGACCACGCTTCTGCGTTTACGAGATGGAGAGACGCAAGTTCTTGCAGGACTCATCTCGGATGACGAGCGCAGGAATGCCAGCAGAATTCCCGGACTCGGCGATATTCCGATGCTGGGGCGGCTGTTTGCGAATCAGGAAGATAAAAAGGATAAGACCGAAATTGTCCTCGCCATCACGCCGCGCATACTCAACAATATCCATCGTCCGGAGTCGGAGCTTTCGGAATATTGGTCCGGAACAGAGTTGAGCATAAACGACAAGCCGCAGATCGTGGTTCCGGGCGCCGCAGGAAGCGGTAATGCGCGCAACATGTCCTCGCGGCCGCCCTCGGAAGTTCCCGCGGTTCAGGAAGAACCCCTGGCTCAACCGGAGGTTCCGGTACAAGCGCCGGCCCCCGTTGGAGCGGGCCAGCCCCAACCGCTCGCCGATCCCTTCGGCTCCCCGCCGGGTATCCGATGA
PROTEIN sequence
Length: 645
MNVGQYGSGLATCLSCIPVFMISACAFAPWQKDGVPGDTPEERIATAQAAQRAKPEDMPTRRDLHVTHERAIYELQQEADIARREGRIADAEALFARLKGIDPANQRAAAGLHAIANERKHATTVEEVYALLGEGNLDAAQARLRAVLLEAPSHAGALELQAEIRRKRNFARNEPPRLRSPFDAPVSLELRDANIKMVFEALSRTTGINFILDKDIKQDAKATVFISQSRIEDAIDMVLATNGLQKKALSETTALVFPNTLQKLKDYQDLMIRSFFLINANAKQMASLLKTMLKSKDVHIDERLNMLVIRDTPEVIRIAEKLVAINDMADPEVMLEMDVLEISRSRLQELGIEYPTTITSAAGLTLQALSSNLISSPLDFLNINSNPAANFKKTISDINVLSNPRVRVRNNEKARVQVGNKVPLITTNVAGTTGTSSESVQYIDVGLKLEVEPRIALDSHVHIKVALEVSSLGISTTLTNGSQVFQIGTRNATTLLRLRDGETQVLAGLISDDERRNASRIPGLGDIPMLGRLFANQEDKKDKTEIVLAITPRILNNIHRPESELSEYWSGTELSINDKPQIVVPGAAGSGNARNMSSRPPSEVPAVQEEPLAQPEVPVQAPAPVGAGQPQPLADPFGSPPGIR*