ggKbase home page

SCNpilot_cont_1000_p_scaffold_1211_6

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(5930..7306)

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal RND efflux outer membrane protein,CzcC family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIR3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 456.0
  • Bit_score: 638
  • Evalue 5.50e-180
  • rbh
Transporter {ECO:0000313|EMBL:KIO48137.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 457.0
  • Bit_score: 643
  • Evalue 1.80e-181
Outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 457.0
  • Bit_score: 616
  • Evalue 5.40e-174
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
TTGATCCGCAGCGGCATTTTCGCGGCCATATTGGCCGCAGTCGTGCTCCCGGTACATGCACAGGTGGAGCTCTCAAGTTGGGCGGGCACGATGGCGCCTGCACAGGTTACCCCCAACACACTCTCGGATGCCTCCGCAAAAACATACAGCAGTCCCTCCGCTCTTCTTACCTCACTGATAGCGGAAGCACTGGAGAAAAACCCGGAAATCCAGGGCGCGCTGCGCGAACGCGATGCGGCCCACTACAGAATAGCCCCGGCTGGAGCGCTCGATGACCCGGTGCTGGAAGCGGGGATCATCAATGCTCCCCTGGCTTCGTCACCCTTCAACCGGGAAGACATGACGATGAAAATGATCGGTTTGTCCCAGCGCTTGCCCTTTCCCGGTAAGCGCGGCTTGCGCAAGGAGGTCGCCGCCAGGGACGCGGAGAGTGTCGGCCACGGCTATCAGGAAACCGTGAATCGGGTGGTGCGCGACATCAAGCTCGCCTATTTCGACCTGGGCCTCATACTGGAAAGAACCCGCATCGTCGAGAAAAACAAGCTGATCCTGGAGGACCTCCTCCACATCGCCGAACGCCACTACGGGGTAGGCATAGGAAGCCTGGCCGACGCGCTGAAGGCGCAAACTCAGGTATCCAGGATGACAGATGAACTGCTCAAGCTGGCGCGGGAAAAACCTGCCATGGAAGCGGAACTCATCCGCGCGCTTAACCGCCGCGCAACCTCCGCAGCGCCAATTCCGGAGCCCCCGCAACTGGGGGAAGAGACCTTGAGCCTGGAAGCCTTGCGCGAAGCGGCTTTTGCGCAGCGCCCGCAACTGCTGGCGCTTCAAAGCATCGTTGCCCGCAACGATAAGGCGCTGGAATTGACCCGTAAAAATTACTACCCCGATCTCGATGTGCGCTTGTCATACGGCCAGCGCGACAACATGCTGGACGGCGCCAGGCGTCCCGACATGGTGAGCTTGACCGTGGCGATGAATTTGCCGATATGGCGCGAGAACAAGCTCGAGCCCCGCGTGAGGGAAACCCTGGCGCTACGCGATCAGGCCCTGGACCTGTATCAGGCGCAGCGCAACGAAGTGAATGCAAGGCTGCGGCAGCAGGTAGAGATGGCAGAACAAAACCTGAAATCGGCGCGGCTCTATAAAACCGCCATCCTCCCACAGGCGCGGCTCACGGTTGAAGCATCATTAAGCGCTTATCGCGTCAATCGTGTCGATTTCCTGACATTGCTCGACAGCCAGATGACGGTATTCAACTATGAAATCAGCCTGGCTGCCGCCATCGCCAGCTACAACAAGGCGCTGGCGGAAATCGATTTGCTCACCGGCAAGCCGCCGGCCAACCTGTCACCATTCGCGGAGCCCCAGTGA
PROTEIN sequence
Length: 459
LIRSGIFAAILAAVVLPVHAQVELSSWAGTMAPAQVTPNTLSDASAKTYSSPSALLTSLIAEALEKNPEIQGALRERDAAHYRIAPAGALDDPVLEAGIINAPLASSPFNREDMTMKMIGLSQRLPFPGKRGLRKEVAARDAESVGHGYQETVNRVVRDIKLAYFDLGLILERTRIVEKNKLILEDLLHIAERHYGVGIGSLADALKAQTQVSRMTDELLKLAREKPAMEAELIRALNRRATSAAPIPEPPQLGEETLSLEALREAAFAQRPQLLALQSIVARNDKALELTRKNYYPDLDVRLSYGQRDNMLDGARRPDMVSLTVAMNLPIWRENKLEPRVRETLALRDQALDLYQAQRNEVNARLRQQVEMAEQNLKSARLYKTAILPQARLTVEASLSAYRVNRVDFLTLLDSQMTVFNYEISLAAAIASYNKALAEIDLLTGKPPANLSPFAEPQ*