ggKbase home page

SCNpilot_cont_1000_p_scaffold_4327_1

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(1..2037)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 679.0
  • Bit_score: 1126
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 679.0
  • Bit_score: 1126
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RPOC_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 679.0
  • Bit_score: 1126
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2037
ATGAATCAAGAGCTGATGAATGTTTTCGGTCAGCAGAAGGAAATCCCCTCCTTCGACCGCATCAAGATTTCGCTGGCCAGCCCCGACCAGATTCTTCGCTGGTCACATGGCGAGATCAAGAAGCCCGAGACGATCAATTACCGCACCTTCAAGCCGGAGCGCGACGGCCTGTTCTGCGCCCGCATCTTCGGTCCGGTGAAGGATTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAGTACAAGGGCATCGTCTGCGAAAAGTGCGGCGTCGAAGTCACCGTGCAGAAGGTGCGGCGCGACCGCATGGGCCATATCGAACTGGCCAGCCCCGTCGCCCACATCTGGTTCCTCAAGTCGCTGCCGTCGCGCATCGGCCTGATCCTGGACATGACGCTGAAGGATCTCGAGCGCGTCCTCTATTTTGAGAACTATATCGTCATCGAGCCGGGCCTCACCCCGCTCAAGGAGCGTCAGCTCCTGACCGAGGACGAGTTCTACAAGGCCCAGGACGAATACGGCAACGACAGCTTCACCGCCGAGATCGGCGCCGAGGCCATCCGCAAGCTGCTGATGGCGATCGATCTCGAAAAGCTGCGTGACGAGATCCGCGGCGATGTCGCCGAGGTTCCCGGCGGCGAGAAGCAGAAGAAGCTGGTCAAGCGCCTGAAGGTGGTCGAGGCATTCCTCGAATCCGGCAATCGCCCGGAATGGATGATCCTGACCGTCGTGCCGGTGATCCCGCCCGAACTGCGCCCGCTGGTCCCGCTGGATGGCGGCCGTTTCGCCACGTCGGACCTCAACGACCTCTATCGCCGCGTCATCAACCGCAACAACCGCCTCAAGCGCCTGATCGAGCTGAAGGCCCCCGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAATCGGTGGACGCGTTGTTCGATAATGGCCGGCGCGGCCGCGTCATCACCGGCGCCAACAAGCGTCCCTTGAAGTCGCTGGCCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTCTTGGGCAAGCGCGTCGACTATTCAGGCCGTTCGGTCATCGTGGTCGGCCCGGAACTGAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTGGAGCTGTTCAAGCCGTTCATCTATGCCCGGCTGGAGGCGAAGGGCTTCAGCCAGACGGTCAAGCAGTCCAAGAAGCTGGTCGAAAAGGAAAAGCCGGAAGTCTGGGACATCCTGGAAGAGGTGATCCGCGAGCATCCGGTGCTCTTGAACCGCGCGCCGACGCTGCACCGGCTTGGCATTCAGGCGTTCGAGCCGGTGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTCTGCACCGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTTCCCCTGTCGCTGGAAGCGCAGCTGGAAGCGCGTGTGCTGATGATGTCGACCAACAACATCCTCAGCCCTGCCAACGGCAAGCCGATCATCGTGCCCACCCAGGACATCGTGCTGGGTCTCTATTATCTGTCGCAGGAGCGTCCGAAGGAGCCCGGCGAAGGCACGGTGTTCAACGACATCGGCGAGATCGAGCATGCGCTCTTCGCCCAGATCGTCACGTTGCACGCCCGCATCAAGGCGCGCTACAAGACGGTCGACGCCGAGGGCAATCCGATCACCCGGCGCGTGGATTCCACGCCGGGCCGCATGCTGATCGCCGATATCCTGCCGCGCCATCCCAAGATCCCGTTCGAACTGGTCAACCGCCTGCTGCGCAAGCAGGAGATTTCCCAGCTGATCGACGAGGTCTATCGCCACTGCGGCCAGAAGGAGACCGTGCTGTTCGCCGACGCGCTGATGGCGCTGGGCTTCCGCGAAGCGTGCAAGGCCGGCATCTCGTTCGGCAAGGACGACATGGTCGTACCTGATTCCAAGACCAAGCTGATCGACGAGACCCGCCACCGGGTGCGCGAGTACGAGCAGCAGTATCAGGACGGCCTGACCACCGACAAGGAGAAGTAC
PROTEIN sequence
Length: 679
MNQELMNVFGQQKEIPSFDRIKISLASPDQILRWSHGEIKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRMKYKGIVCEKCGVEVTVQKVRRDRMGHIELASPVAHIWFLKSLPSRIGLILDMTLKDLERVLYFENYIVIEPGLTPLKERQLLTEDEFYKAQDEYGNDSFTAEIGAEAIRKLLMAIDLEKLRDEIRGDVAEVPGGEKQKKLVKRLKVVEAFLESGNRPEWMILTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPDIIVRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYARLEAKGFSQTVKQSKKLVEKEKPEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPTQDIVLGLYYLSQERPKEPGEGTVFNDIGEIEHALFAQIVTLHARIKARYKTVDAEGNPITRRVDSTPGRMLIADILPRHPKIPFELVNRLLRKQEISQLIDEVYRHCGQKETVLFADALMALGFREACKAGISFGKDDMVVPDSKTKLIDETRHRVREYEQQYQDGLTTDKEKY