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SCNpilot_cont_1000_p_scaffold_8002_5

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(4030..4332)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein (Fragment) n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F8N4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 97.0
  • Bit_score: 104
  • Evalue 8.20e-20
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EHS50839.1}; Flags: Fragment;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 97.0
  • Bit_score: 104
  • Evalue 1.20e-19
CspA-like protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 102.0
  • Bit_score: 96
  • Evalue 4.10e-18

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGCAACAGGCAAGGTCAAGTGGTTCGACGCGAGCAAGGGCTATGGCTTCATAAGGCCTGACGACGGCAGCCCAGATGTTTTCGTGCATCTCAGTGAAGTGCTGAAGGTGAAGCTCCCTCATCTGCGGCCAGATGTGCCTATTGCCTATACTCTCGAGGTTGAAGGCGGCAAAAGGTCGGCAAAGGAGCTATCGCCAGCGAGTGCCAGCGCCACTTCAACACCCCTCAGCGGAATGAGGGATGATCCACTCACAGATTTCACAGACGAATTCGAAAAAGAACGGGGACTAAGGCAAGCCTGA
PROTEIN sequence
Length: 101
MATGKVKWFDASKGYGFIRPDDGSPDVFVHLSEVLKVKLPHLRPDVPIAYTLEVEGGKRSAKELSPASASATSTPLSGMRDDPLTDFTDEFEKERGLRQA*