ggKbase home page

SCNpilot_cont_1000_p_scaffold_8002_6

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(4364..4681)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=2 Tax=Rhizobium RepID=L0LPS7_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 100.0
  • Bit_score: 168
  • Evalue 2.90e-39
integration host factor, beta subunit similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 100.0
  • Bit_score: 168
  • Evalue 9.00e-40
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 100.0
  • Bit_score: 168
  • Evalue 4.00e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGATCAAATCCGAGCTTATCGAACTGATTTCGAGCCGCAGGCCCTTTCTGCATCTCAACGATGCGGAAAAGATTGTCGATGCAATCCTGGAGGAAATGTCTGAAGCCCTGATGCGCGGCGACAGGGTTGAGCTGCGAGGATTCGGTGCGTTCAGTATCCGCCATCGCCCACCAAAATCAGGCAGAAACCCCAAAACGAACACCTCGATTTTCATCGAACAAAAGTGGGTTCCGTTTTTCAAGGCAGGAAAAGAAATGCAAGAGCGCCTGAACGCTGCACGCAAGTTTGATGCGAGTAGGCCAAGTCCTGCTGACTGA
PROTEIN sequence
Length: 106
MIKSELIELISSRRPFLHLNDAEKIVDAILEEMSEALMRGDRVELRGFGAFSIRHRPPKSGRNPKTNTSIFIEQKWVPFFKAGKEMQERLNAARKFDASRPSPAD*