ggKbase home page

SCNpilot_cont_1000_p_scaffold_70851_1

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(1..324)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CAG2_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 90.0
  • Bit_score: 91
  • Evalue 4.50e-16
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 90.0
  • Bit_score: 91
  • Evalue 1.40e-16
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADZ80932.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 90.0
  • Bit_score: 91
  • Evalue 6.30e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 324
ATGTATTCTTTTAAGGCTTTAAGTACAAAACAAATTAATGATTTTCGAGAGGGCAACGAAATAGCTTTTAAGGAAATATATGTGCTTTTTAGCCCGAAGGTTTATGCTTTTGCTTATAGCTTTTTAAAGGATCAGTTGCAAAGCGAAGAAATTGTACAAGAAACATTCTTATCCCTTTGGGAAAACCGTGGGAAATTTGATGCTGATAAAGTTTTGGAACCTTATCTTTTTACTATTGCAAAACGGCAAATTCTAGATCAATTAAGGAAAGTTATAAGTACAAAAAAACTTCGAGAAAACCTATTGACTAGCATTATAACTCAA
PROTEIN sequence
Length: 108
MYSFKALSTKQINDFREGNEIAFKEIYVLFSPKVYAFAYSFLKDQLQSEEIVQETFLSLWENRGKFDADKVLEPYLFTIAKRQILDQLRKVISTKKLRENLLTSIITQ