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SCNpilot_cont_1000_bf_scaffold_9_18

Organism: SCNPILOT_CONT_1000_BF_Rhizobiales_65_18

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 15114..16172

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDP53815.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDP53815.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 351.0
  • Bit_score: 439
  • Evalue 5.30e-120
23S rRNA (uracil-5-) -methyltransferase RumA; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 352.0
  • Bit_score: 380
  • Evalue 5.00e-103
  • rbh
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA33_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 352.0
  • Bit_score: 380
  • Evalue 1.60e-102
  • rbh

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGCTCCCTGATCTGTCCGAGCCGGAAGACCGCCGCGACCCGTTCTGCCGCTATTTCGGCACCTGCGGCGGCTGCACGCTGCAGCATTTCGGCCCCGCCGCCTACGATGCGCTGAAGCGCGGGCTGGTGGAGGACGCGCTGCGCCACGCCCATGTGGCGGCGGCGCTGAACCCCATGCTCGCCGCCCATGGCGACGGCCGAAGGCGGGCGACGCTGCATGCCCGCGGCAAGGCGGTGGGCTACATGCAGGCGCGCAGCCACGATTTGCTCGACATCGCCGCCTGCCCGATCCTGGTGCCGGCGCTGGCGCAGCGCGCCGTGACGCTGACCCATCCCATCGCCGCGACCGTCGGCGATTGCGACGTGGCCTATACCGCGACCGACACCGGCCTCGACGTCGCCATCCGCACCGAGCGCCGATTCAAGGCCGAGCGGCTGACGCTGCTGGCGCAGCGCTCGGGCGCGGCGCGGCTGTCGCTCAATGGCGAGATCGTCATCGAGACGCGGCCGCCGGCGGTGAGGATGGGCAAGGCGCTGGTCGAGATTCCGGTCGCGAGCTTCCTGCAGGCGACCGCCGAGGCCGAGGCGGTGCTGGCGCGGCTGGTGCGTGACGGCGTCGGGCCGGCGAAATCGGTGGCCGACCTGTTCTGCGGCATGGGCCCGTTCACGCTGCGGCTGGCCGAAACGGCGCGCATCTTTGCCGCCGATGCCGACCGGCCGGCCATCGCCGCGCTGCACAAGGCCGTGAAGCACACACAGGGGCTGAAGCCGGTGACGGCGGCCGTCCGCGACCTGTTCCGCGAGCCGCTGCTGCCGCGCGAGCTCGACGCCCACGACGCCGTGGTGTTCGACCCGCCCCGCGCCGGCGCCGAGGCGCAGGCCCGCGAGCTGGCGAAGTCGAAGGTCAGGACCGTGGTGGCGGTGTCGTGCGAGCCGCGCACCTTCGCCCGCGACGCGGCGATATTGATTGCCGGCGGCTACCGGCTGGAGAGCGTGACGCCGGTCGACCAGTTCGCCTGGTCGATGCATGTGGAGGTGGTGGGGGTGTTCCGGCGGTGA
PROTEIN sequence
Length: 353
MLPDLSEPEDRRDPFCRYFGTCGGCTLQHFGPAAYDALKRGLVEDALRHAHVAAALNPMLAAHGDGRRRATLHARGKAVGYMQARSHDLLDIAACPILVPALAQRAVTLTHPIAATVGDCDVAYTATDTGLDVAIRTERRFKAERLTLLAQRSGAARLSLNGEIVIETRPPAVRMGKALVEIPVASFLQATAEAEAVLARLVRDGVGPAKSVADLFCGMGPFTLRLAETARIFAADADRPAIAALHKAVKHTQGLKPVTAAVRDLFREPLLPRELDAHDAVVFDPPRAGAEAQARELAKSKVRTVVAVSCEPRTFARDAAILIAGGYRLESVTPVDQFAWSMHVEVVGVFRR*