ggKbase home page

SCNpilot_cont_1000_bf_scaffold_531_23

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 21978..22313

Top 3 Functional Annotations

Value Algorithm Source
Putative baseplate assembly protein W n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DR34_PHAIB similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 108.0
  • Bit_score: 115
  • Evalue 3.00e-23
Baseplate assembly protein {ECO:0000313|EMBL:KJH82850.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 109.0
  • Bit_score: 116
  • Evalue 1.90e-23
baseplate assembly protein W similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 108.0
  • Bit_score: 115
  • Evalue 9.50e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAACGGAATGGACGCCACCACAGGAAAGCCCCTCTCGGGCGATGCGCATCTGGCGCAGTCGGTGGTCGATATCCTCACCACACCGCTCGGCTCGCGCGTGATGCGCCGTACCTATGGCTCGCTAATCCCCAGCCTCATTGACGCGCCGATCAATGCGGCCACCCCCATGCTGATCCGCGCCGCCACGGTCCTCGCCATCCGCGCGTGGGAGCCGCGCCTCTCCATCGCCCGCGTCCGCCTGTTCGGAACGCCCGCGAGGGGCAAACTCACCATCCAGATCAGCGGGCAACGCGCCGACACCGGCAAACCCGTCACCCTCTCTATCGCCGCCTGA
PROTEIN sequence
Length: 112
MNGMDATTGKPLSGDAHLAQSVVDILTTPLGSRVMRRTYGSLIPSLIDAPINAATPMLIRAATVLAIRAWEPRLSIARVRLFGTPARGKLTIQISGQRADTGKPVTLSIAA*