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SCNpilot_cont_1000_bf_scaffold_801_22

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 19381..19761

Top 3 Functional Annotations

Value Algorithm Source
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 5.00e-53
DNA mismatch endonuclease Vsr n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WNT8_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 1.60e-52
Very-short-patch mismatch repair endonuclease (G-T specific) {ECO:0000313|EMBL:EWC60057.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 124.0
  • Bit_score: 214
  • Evalue 1.00e-52

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGTCGCGCCAGCGGGCCCGGGACACCGGTGCGGAGTTGTCGTTGCGACGGGAGCTGCATCGGCTCGGGCTGCGCTACCGGGTGCATCGTCGGCCAGTGCCCGGGGTCCGGCGGGAGGCGGATGTGGTGTTCGGGCCGTCGCGGGTGGCGGTGTTCGTGGACGGCTGCTTCTGGCACGGCTGTCCGGAGCACGCGACGTGGCCGCGGTCGAATGCTGAGTTCTGGCGCGCCAAGATCGAGGGCAACCGACGGCGGGACACCGATACCGATCGTCGCTTGGCCGAGGTGGATTGGGCGGTGCTGCGCATCTGGGAGCACGAGGATCCCGCGACGGCGGCACGCCGTGTGCAGGATCTGGTCGCGACACGCCGACCGCGATGA
PROTEIN sequence
Length: 127
MSRQRARDTGAELSLRRELHRLGLRYRVHRRPVPGVRREADVVFGPSRVAVFVDGCFWHGCPEHATWPRSNAEFWRAKIEGNRRRDTDTDRRLAEVDWAVLRIWEHEDPATAARRVQDLVATRRPR*