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SCNpilot_cont_1000_bf_scaffold_589_29

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 29310..30827

Top 3 Functional Annotations

Value Algorithm Source
Choline/carnitine/betaine transporter n=1 Tax=Serratia plymuthica A30 RepID=L0VUL3_SERPL similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 490.0
  • Bit_score: 746
  • Evalue 2.10e-212
  • rbh
betT; high-affinity choline transport protein BetT similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 490.0
  • Bit_score: 744
  • Evalue 1.90e-212
  • rbh
High-affinity choline transport protein BetT {ECO:0000313|EMBL:AGO56765.1}; TaxID=682634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica 4Rx13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 490.0
  • Bit_score: 744
  • Evalue 8.40e-212

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Taxonomy

Serratia plymuthica → Serratia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGCATGCCCGTCCGCAACTCAACGCGCCGGTGTTCTACAGCTCGGCCATCCTCATCCTCGTGCTCGGCGCGCTCACGGTGGTCTTTCCGCAGGCGAGCCAGCACTGGCTGAACGAAGCGCAGGCGTGGGTCTCGCGCGTGTTCGGCTGGTACTACATGCTGGTGATGGTGACCTGCATGGCCTTCGTGCTGTGGCTGGCGGCCTCGCGCCACGGCACGATCCGGCTGGGCAAGGACGATGAACGGCCGGCCTTCAGCTACGCCTCGTGGACCTCGATGCTGTTCTCCTCCGGCATCGGCATCGCCTTGCTCTACTACGGGGTGTACGAGCCGCTCGACCACTTCCTGTCACCGCCGCAGGGCGCGGGCCAGACCGCGCAGGCGGCACGCACCGCCATGGTCACCACCTTCCTGCACTGGGGCCTGCACGGCTGGGCGCTGTACGCGTTGATCGCCATCGCGCTCGGCTACTTCGCCTATCGTCGCGACCTGCCGCTGGCCCTGCGTTCGGCGCTGTACCCGCTGTTCGGCAAGCGCATCCACGGCTGGGTCGGCGACCTGGTCGACGGCTTCGGCATTCTGGTCACCCTGGTGTCGATGGTGACCAACCTCGGCATCGGCGCGCTGCTGCTCGACTCCGGCCTGCGTTACCTGTTCGGCATTCCGGCCACGCCGCAGGTGCTGGTGGGGCTGGTGATCGTGATGATGGTGGTGGCGACGGTCGCCGCGATGTCGGGAGTGGAGAAGGGCATCGCCATGCTCTCCAACCTCAATATCCGGCTGCTCTGCATGCTGCTGCTGTTCGTGCTGGTGACCGGGCCCACCCTGCACCTCTTCGACGGCATGGTGCAGAACTCGGGCGACTACTTCACCTCGTTCGTGGGCCGCAGCTTCGACCTCTACCTGTACGACCATGCGCGCGGCTGGCTGGGCGCGTGGACGCTGTTCTACTGGGCCTGGTGGATCGCGTGGGCGCCGTTCGTCGGCATGTTCATCGCGCGCATCTCGCGCGGGCGCACCGTCCGCGAGCTGGTGATCGGCGTGCTGCTGATCCCGTTGGGCTTCACCCTGGCGTGGCTCTCGATCTTCGGCAACGCCGCCATCGACCTGGTGTTCAACCATGGCGTCGCGGAGCTGGGGCAGGTGGCGCAGGCCGATCCGCCGATGGCGCTGTTCAAGCTGTTCGAGTACCTGCCGTGGACCCGCCTCGTCGCCGGCGTCACCGTGCTGATCGGTTTCGTGCTGTTCCTGACGCCGGTGGACTCGGGCACCCTGATGATCGCCAACCTCTCCACCCGCGCTGGCTCGGGTGAGGGCGATGCGCCGGTGTGGCTGCGCGTGTTCTGGGCGGCGGCGACCACGGTGGTGGGCATCGGCCTGCTGCTCGGTGGCAGTTTCAGCGCGATGCAGACGGCGGTGGTGCTGTGCGGCCTGCCGTTCTCCGTGGTGCTGCTGCTGTACACGTGGAGCCTGCGCAAGGTGCTGGCCGAGGAAGTCGATTCCGGCGGCGGCGCGTGA
PROTEIN sequence
Length: 506
MHARPQLNAPVFYSSAILILVLGALTVVFPQASQHWLNEAQAWVSRVFGWYYMLVMVTCMAFVLWLAASRHGTIRLGKDDERPAFSYASWTSMLFSSGIGIALLYYGVYEPLDHFLSPPQGAGQTAQAARTAMVTTFLHWGLHGWALYALIAIALGYFAYRRDLPLALRSALYPLFGKRIHGWVGDLVDGFGILVTLVSMVTNLGIGALLLDSGLRYLFGIPATPQVLVGLVIVMMVVATVAAMSGVEKGIAMLSNLNIRLLCMLLLFVLVTGPTLHLFDGMVQNSGDYFTSFVGRSFDLYLYDHARGWLGAWTLFYWAWWIAWAPFVGMFIARISRGRTVRELVIGVLLIPLGFTLAWLSIFGNAAIDLVFNHGVAELGQVAQADPPMALFKLFEYLPWTRLVAGVTVLIGFVLFLTPVDSGTLMIANLSTRAGSGEGDAPVWLRVFWAAATTVVGIGLLLGGSFSAMQTAVVLCGLPFSVVLLLYTWSLRKVLAEEVDSGGGA*