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SCNpilot_cont_1000_bf_scaffold_1290_6

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: comp(8283..8690)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 131.0
  • Bit_score: 162
  • Evalue 3.70e-37
Ribonuclease VapC n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSW3_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 131.0
  • Bit_score: 162
  • Evalue 2.60e-37
putative pilT protein, N-terminal, putative toxin of TAS system similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 131.0
  • Bit_score: 162
  • Evalue 8.30e-38

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Taxonomy

Blastococcus saxobsidens → Blastococcus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGATCGTCGATACCTCGGCGCTCATCGCCCTGGTGAAGGACGAGCCCGACGCGTCAGCCGTGCTCGCCGCCCTCGCTCGGGACACTCGCCCTGCGATCTCGGCGGCGACTCTGCTGGAGGCGTCGATCGTCGCCGACGGCTCGCGCGATCCGGTGCGGTCAGCGCGCTTCACGGCCCTGCTCGATGCCCTGTCGTTGGAGGTGGTGCCTTTCACGGCGGTTCAGGCGGCGGCCGCTCGACATGCCTACCGCGAGTACGGCAGGGGGTCCGGCCATCCGGCGCGTCTCAACCTCGGCGACTGCTTCGCCTATGCACTCGCGACGGAACGTCACGAGCCGCTCCTCTACGTCGGCGACGACTTCGCCCGGACAGACGTGCGTTCAGCCCTCCCTCGCACCGAGCGGTAG
PROTEIN sequence
Length: 136
MIVDTSALIALVKDEPDASAVLAALARDTRPAISAATLLEASIVADGSRDPVRSARFTALLDALSLEVVPFTAVQAAAARHAYREYGRGSGHPARLNLGDCFAYALATERHEPLLYVGDDFARTDVRSALPRTER*