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SCNpilot_cont_1000_bf_scaffold_2233_7

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: 6857..7303

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Microbacterium yannicii RepID=UPI000309A6DF similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 148.0
  • Bit_score: 279
  • Evalue 2.10e-72
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 148.0
  • Bit_score: 279
  • Evalue 3.90e-72
rplM; ribosomal protein L13; K02871 large subunit ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 148.0
  • Bit_score: 265
  • Evalue 9.90e-69

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 447
GTGACGCGCACATACACCCCCAAGGCCGGCGAAGTCCAGCGCGAGTGGCTCATCATCGACGCGACCGACGTCGTCCTGGGCCGTCTCGCCTCCCACGCCGCCACGCTCCTGCGGGGCAAGCACAAGCCCACCTTCGCCAACCACATCGACACCGGCGACTTCGTCATCATCATCAACGCCGACAAGGTCGCGCTGACCGGGCAGAAGCTCGAGCAGAAGAAGGCCTACCGCCACTCGGGCTACCCGGGCGGCCTGAAGTCGGTGACCTACAGCGAGCTGCTCGAGAAGAACCCGGAGCGCGCCGTCGAGAAGGCCGTGCGCGGCATGCTCCCCAAGAACAGCATCGGTGCCCAGCAGCTGCGCAAGCTCAAGGTGTACCGCGGCGCCGAGCACCCCCACGGTGCGCAGCAGCCGAAGACGTACACCCTCGACCAGGTCGCCCAGTAA
PROTEIN sequence
Length: 149
VTRTYTPKAGEVQREWLIIDATDVVLGRLASHAATLLRGKHKPTFANHIDTGDFVIIINADKVALTGQKLEQKKAYRHSGYPGGLKSVTYSELLEKNPERAVEKAVRGMLPKNSIGAQQLRKLKVYRGAEHPHGAQQPKTYTLDQVAQ*