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SCNpilot_cont_1000_bf_scaffold_4750_6

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: 4383..5420

Top 3 Functional Annotations

Value Algorithm Source
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 279.0
  • Bit_score: 485
  • Evalue 1.40e-134
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 279.0
  • Bit_score: 485
  • Evalue 6.30e-134
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373BA84 similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 280.0
  • Bit_score: 492
  • Evalue 3.70e-136

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCGCCGCGTCCTCGTCCTCGGCTCCACCGGGTCCATCGGCACGCAGGCGCTGGATGTCGTGCGGGCGAACCCCGAACGCTTCGAGATCGTCGGCCTCGCCGCCGGGTCGAACCGCGCGGCGCTCGAGGCGCAGGCCGCGGAGTTCGGGGTGGAGCACGTCGCCCTCGGCGCGGAGGCGGAGCAGCTGGTGCGCGACGTCGACGCGGACGTCGTCCTCAACGGGATCACCGGGTCGGTGGGGCTCGGTCCCACGCTCGCCGCGCTCGAGACCGGCCGGACCCTCGCGCTGGCCAACAAGGAATCGCTGATCGTGGGCGGCGACCTCGTCACTGCGCTCGCCGAGCCGGGTCAGATCGTGCCGGTCGACTCCGAGCACTCCGCGATCGCGCAAGCCCTGCGCTCCGGCGACAGGTCTGAAGTACGTCGTCTCGTCCTCACCGCGTCGGGCGGTCCGTTCCGCGGGCGCCGCCGCGATGCGCTGGCGGCCGTCACCCCTGCCGAGGCGCTCGCGCACCCGACGTGGGACATGGGGAGGGTGGTGACCACCAACTCCGCGACGCTCGTCAACAAGGGACTCGAGGTCATCGAGGCGCATCTGCTGTTCGACGTCCCGTACGACCAGATCCAGGTCGTCGTCCATCCGCAGTCGATCGTCCACTCCATGGTCGAGTTCGTGGACGGCTCCACGATCGCGCAGGCGTCCCCGCCGGACATGCGTCTGCCGATCTCCCTGGGCCTCGACTGGCCCCATCGCGTCGGCGGCGTCGGCCGGCCGCTCGACTGGACCGCGGCCGCGTCCTGGACGTTCGAGCCGCTCGACGAGGACGCCTTCCCGCGACGCGGCGGATCGGGTGATCTCCGCGGCGTGAGCCCGGTCGCGCGGATCAGTCCGACCAGGCGCGGGAGGGGTCCGACAGCGGCGTCTCGTCGTCCGGGTAGGGGACGGGCCAGTGCGGGTCGGGCACGGGCCACCCCGCCGCGCGAAGCGCGCGACGGGCGAGCTCACGCGCCGAGTACGGCGTGCGCATCCCCCTGA
PROTEIN sequence
Length: 346
MRRVLVLGSTGSIGTQALDVVRANPERFEIVGLAAGSNRAALEAQAAEFGVEHVALGAEAEQLVRDVDADVVLNGITGSVGLGPTLAALETGRTLALANKESLIVGGDLVTALAEPGQIVPVDSEHSAIAQALRSGDRSEVRRLVLTASGGPFRGRRRDALAAVTPAEALAHPTWDMGRVVTTNSATLVNKGLEVIEAHLLFDVPYDQIQVVVHPQSIVHSMVEFVDGSTIAQASPPDMRLPISLGLDWPHRVGGVGRPLDWTAAASWTFEPLDEDAFPRRGGSGDLRGVSPVARISPTRRGRGPTAASRRPGRGRASAGRARATPPREARDGRAHAPSTACASP*