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SCNpilot_cont_1000_bf_scaffold_6157_5

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: comp(5233..6138)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 295.0
  • Bit_score: 455
  • Evalue 8.00e-125
formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 295.0
  • Bit_score: 448
  • Evalue 2.20e-123
  • rbh
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003731035 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 304.0
  • Bit_score: 472
  • Evalue 2.60e-130
  • rbh

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 906
GTGCCTGAGCTCCCCGAGGTCGAGGTCGTTCGCGCCGGCTTGGCGCCGGCCGTATCCGGGGCGTTCGTGACCGGGGTCAGCGTGCTCGACGAGCGCGCCCTCACGCGCCACGCGGGATCGTCAGCGGAATTCGAGGCGGCTTTGACCGGTCGGACGCTGATCTCGGCCGTCCGTCGCGGCAAGTTCCTCTGGATCCCGATCGCCGAGACGGGAACGGCGGTGGTCGGCCATCTGGGGATGAGCGGCCAGCTGCTGCTGCGCTCTCCGGGGGCGGCCCCGGAACGCCACGAGCGGGTCCGGATCGAGCTCGAGCATCCTCAGCACGGCGAGCTGGCCGTCGTCTTCGCCGACCAGCGCACGTTCGGCTCACTGGCGATCGATGCGCTCATGCCCACGTCGGACGGAGCCCCCGGAGGCCGGGGGGACCCGGCGCCATCCGTGCCGACCCAGGTGGCCCACATCGCACGAGACCCGCTCGATCCCGCGTTCGACGACCGTGGGCACCACCGCGCCCTCTCGCGCAAGGCATCCGCGATCAAGCGGGTCCTCCTCGACCAGACCGTCCTCAGCGGCATCGGCAACATCTACGCCGACGAGGCACTGTGGGCGGCCCGCATCCACCCCGAGACGCCCGCCCGCGCGCTGTCCTCGCGTGCATCGCGCCGGCTGCTCATGGAGGTCCGCGCCGTGCTCGAGCGCGCTCTCGCCGAGGGCGGCACGAGCTTCGACGCCCAGTACGTCAACGTGAACGGGCAGGCCGGGTACTTCGCCCACTCTCTGAACGCCTACGGACGGACCGGCGAGCCATGTGCCCGGTGCGGCCGACCCATCGTGCGGGTGTCGTTCATGAACAGGTCGAGCCACTACTGCCCGCACTGCCAGCGCGCGCCCCGCCCGACCGCCTGA
PROTEIN sequence
Length: 302
VPELPEVEVVRAGLAPAVSGAFVTGVSVLDERALTRHAGSSAEFEAALTGRTLISAVRRGKFLWIPIAETGTAVVGHLGMSGQLLLRSPGAAPERHERVRIELEHPQHGELAVVFADQRTFGSLAIDALMPTSDGAPGGRGDPAPSVPTQVAHIARDPLDPAFDDRGHHRALSRKASAIKRVLLDQTVLSGIGNIYADEALWAARIHPETPARALSSRASRRLLMEVRAVLERALAEGGTSFDAQYVNVNGQAGYFAHSLNAYGRTGEPCARCGRPIVRVSFMNRSSHYCPHCQRAPRPTA*