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SCNpilot_cont_1000_bf_scaffold_1030_4

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 10 / 38
Location: comp(2836..3213)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS12_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 125.0
  • Bit_score: 242
  • Evalue 3.20e-61
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 125.0
  • Bit_score: 248
  • Evalue 4.70e-63
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 125.0
  • Bit_score: 242
  • Evalue 9.90e-62

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCCGACAATCAGTCAGTTAGTAAGGAAGCCTCGTGCGGCCAGGAGGGTCAAGAGCAAGGTCCCTGCGCTGGGAAACAGTCCGCAGAAGCGCGGCGTTTGCACTCGGGTTTATACCACGACGCCCAAAAAACCGAATTCCGCATTGCGCAAGGTAGCACGGGTCCGGCTGACTAATGGATTTGAAGTATCGAGCTATATAGGTGGAGAGGGGCACAATCTCCAGGAACACTCGGTAGTTTTGATTCGCGGCGGGCGTGTCAAAGACTTGCCAGGCGTTCGTTACCATACTGTGCGCGGAAGCCTGGATACGGCCGGAGTCAAGGACCGTAAGCAAAGTCGTTCCAAGTATGGCGCCAAAAGACCGAAAGCAGCATAG
PROTEIN sequence
Length: 126
MPTISQLVRKPRAARRVKSKVPALGNSPQKRGVCTRVYTTTPKKPNSALRKVARVRLTNGFEVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDTAGVKDRKQSRSKYGAKRPKAA*