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SCNpilot_cont_1000_bf_scaffold_2644_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 10 / 38
Location: 3676..4872

Top 3 Functional Annotations

Value Algorithm Source
Response regulatory protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH39_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 398.0
  • Bit_score: 718
  • Evalue 4.80e-204
  • rbh
Response regulatory protein {ECO:0000313|EMBL:CCU61834.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 398.0
  • Bit_score: 718
  • Evalue 6.70e-204
two component sigma-54 specific Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 398.0
  • Bit_score: 688
  • Evalue 1.70e-195
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGGATCTCGGGCTTCCCCCCGATCCCGATGGGGCTTCCGAAGGGCTCGCAACACTGGAGCAAATACTCGAGCTTGCACCGGATACCAAGCTGATAGTTCTTACAGGGAATCAGGATCATGGGAACGCATTGAAGGCTATCGGTTTGGGCGCTTATGACTTTCATCAGAAGCCCTTTGACTCCGACATGCTGAGCCTGGTCGTGGAAAGGGCATTTTACGTTTATGCCTTGCAGCAGGAGAACCGCCGCTTATTGCAGACTCAGGCATACTCGCTCATTACGGGCATCATTACCCGGGACCCTGCATTGCTCAAGGTATGCCGCAGCGTCGAAAAGGTGGCGCCATCCGACGCAACCGTGATGCTGCTCGGGGAAAGCGGTACAGGCAAGGAAATTCTGGCTCGGGCGCTGCACCAGTCGAGTGCCAGGCAGGGGAAGCGTTTCATGGCCATCAATTGCGCCGCCATTCCCGAATCCTTGCTGGAAAGCGAATTGTTCGGGTATGAGAAGGGTGCGTATACCGGCGCGGCGAAGCAGACGCTGGGCAAAATCGAGCTTGCCGATGAAGGCACCTTTTTTCTTGATGAGGTGGGCGATCTGCCCATGGCATTACAGGCGAAATTGCTCCGGTTCCTGCAGGAAAGAGTCATCGAGCGTATCGGAGGACGCAAGGAAATACCGGTGGATGTCCGTATCGTCTGTGCGACCCATCAGAACCTGAAGAAGTTGATCGAGGAGGGGCGGTTTCGCGAGGATCTCTATTATCGGCTCAGCGAGATCGTTATTACGATTCCCCCTTTGCGAGAACGGATCGGGGATGCCGCCTTGCTGGCGCATCACTTTAAAAACAAATTCTGTGCGCAGGAGAAACGCTCCTCCCTGAATTTCAGCCAGGAGGCAATTGCCGCGATCGAAGGCCATCCCTGGCCCGGCAACGTGCGGGAGATGGAGAACTGCATCAAGCGTGCGGTCATCATGGCGGATGGTCCTCTGATCACCGCCGAAGATCTCGGTTTGCAATCCGCCGCTGCTCTTGCCGACCCCATCAACCTTAGGCAGATACGGGACAAGGCAGAGTGCGACGCGCTCATGAAGGCGCTGGCCCGAGTGGACGGAAATGTTGTCAAGGCGGCGGAGCTGCTCGGTGTGAGCCGGCCCACCATTTACGATTTGATGAACCGGCACGGGCTGAAATGA
PROTEIN sequence
Length: 399
MDLGLPPDPDGASEGLATLEQILELAPDTKLIVLTGNQDHGNALKAIGLGAYDFHQKPFDSDMLSLVVERAFYVYALQQENRRLLQTQAYSLITGIITRDPALLKVCRSVEKVAPSDATVMLLGESGTGKEILARALHQSSARQGKRFMAINCAAIPESLLESELFGYEKGAYTGAAKQTLGKIELADEGTFFLDEVGDLPMALQAKLLRFLQERVIERIGGRKEIPVDVRIVCATHQNLKKLIEEGRFREDLYYRLSEIVITIPPLRERIGDAALLAHHFKNKFCAQEKRSSLNFSQEAIAAIEGHPWPGNVREMENCIKRAVIMADGPLITAEDLGLQSAAALADPINLRQIRDKAECDALMKALARVDGNVVKAAELLGVSRPTIYDLMNRHGLK*