ggKbase home page

SCNpilot_cont_1000_bf_scaffold_39061_4

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 10 / 38
Location: comp(1903..2001)

Top 3 Functional Annotations

Value Algorithm Source
Capsular polysaccharide biosynthesis protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DMD6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 32.0
  • Bit_score: 62
  • Evalue 6.90e-08
UDP-phosphate glucose phosphotransferase {ECO:0000313|EMBL:KIO47865.1}; Flags: Fragment;; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 32.0
  • Bit_score: 64
  • Evalue 4.30e-08
sugar transferase; K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 32.0
  • Bit_score: 61
  • Evalue 8.20e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 99
CACGACCTCGACTACCTGCGCAACTGGTCCCTGCGCCTGGACCTGCATATCATCCTCAAAACCATCATGGTCGTGTCCAAAGACCGTAGCGTGTACTGA
PROTEIN sequence
Length: 33
HDLDYLRNWSLRLDLHIILKTIMVVSKDRSVY*