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SCNpilot_cont_1000_bf_scaffold_19416_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(5134..5553)

Top 3 Functional Annotations

Value Algorithm Source
Winged helix family two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 139.0
  • Bit_score: 257
  • Evalue 6.20e-66
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:EIL93351.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 139.0
  • Bit_score: 257
  • Evalue 8.70e-66
two component system regulatory protein; K07667 two-component system, OmpR family, KDP operon response regulator KdpE similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 132.0
  • Bit_score: 176
  • Evalue 4.40e-42

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
TACGTGACCAAGCCGTTCGGCATGCAGGAACTGATGGCCAGGCTGCGTGCCCTGCTGCGCCACCATCCCGCCACCGGCGCGGCCGACGTGCCGCCGCGGTATGACGACGGCCATCTGGCGATCGACCTGGCCCGTCGCGAAGTCAGCCTCGATGGCAAACAGATCGCGCTGACCCGCAAGGAGTACGCCGTGCTCTCCCTGCTGCTGCGCCATGCCGGCCGCGTGATCAGCCAGCAGCAATTGCTGCGCGAAGTGTGGGGGGCGACGCATGTGCAGGACACGCATTACCTGCGCATCGTGCTGGGCCGCCTGCGCCAGAAGCTGGGCGATGATCCCGCCGCACCACGCTGGCTGAAGACCGAGCCGGGCATAGGCTACCGTTTCCTGGACGGCAGCGGCGACGAGTCCGCACCCAGCTGA
PROTEIN sequence
Length: 140
YVTKPFGMQELMARLRALLRHHPATGAADVPPRYDDGHLAIDLARREVSLDGKQIALTRKEYAVLSLLLRHAGRVISQQQLLREVWGATHVQDTHYLRIVLGRLRQKLGDDPAAPRWLKTEPGIGYRFLDGSGDESAPS*