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SCNpilot_cont_1000_bf_scaffold_17516_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(3125..4297)

Top 3 Functional Annotations

Value Algorithm Source
Arginine decarboxylase {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|RuleBase:RU003740, ECO:0000256|SAAS:SAAS00212226};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 389.0
  • Bit_score: 703
  • Evalue 1.70e-199
arginine decarboxylase (EC:4.1.1.19) similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 389.0
  • Bit_score: 686
  • Evalue 4.70e-195
Arginine decarboxylase (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA98_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 389.0
  • Bit_score: 703
  • Evalue 1.20e-199

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
CTGAAGCTGCAGCACTTCCACATGGGCTCGCAGATCTCCAACGTGCGCGACATCGCCAACGGCATGCGCGAGGCCACCCGCTACTTCGTCGAACTCTCGCACATGGGCGTGCCGCTGGAGATCGTCGACGTCGGCGGCGGCCTGGGTGTGGATTACGAAGGCACCCGCTCGCGCAGCCACAACTCGATCAACTACTCGCTGGAACAGTACGCCGCCACCATCGTGCAGTCGCTGGCCGAGGCGGTGAGCGCCGAGGGCCTGGCCGCGCCGCACATCCTCACCGAGGCAGGCCGGGCGATGACCGCGCACCACGCGGTGATGGTGGTCAACGTGACCGAGGTCGAGCAGGTGCCGGCCGGCAGCATGCCGTCGCCGCGCGGGGACGAGCCGGCGGTGCTGCGCCACCTGCGCGAGGTCCACGCGGCGCTGGACGAGCGCCCGCCGCTGGAGCTGTTCCACGAGGCCCAGCATCACCTGGCCGAAGGGCAATCGCTGTACGCGCTGGGCCAGCTGTCGCTGGCCGACCGCGCGCGACTGGACGAGATGTTCTACGCCATCGCCAATGCCGTGCGCGGGCGCCTGCTGCCGGCCGAGCGCGCGCACCGACAGGTGCTGGACGAGCTGGACGAGAAGCTGGTGGACAAGTACTTCACCAACTTCTCGGTATTCGAATCGATCCCCGACGTGTGGGCGATCGACCAGGTGTTCCCGATCATGCCGATCGCGCGGCTCGACGAGGAGCCGACCCGGCGCGGCGTGATCGTCGACCTCACCTGCGATTCGGACGGCCGCATCGACCACTACGTGGAGGCCGACGGCGTCGACGTCAGCCTGCCGCTGCATGCGCTGAAGGACGGCGAGAGCTATCGGCTGGGCATCTTCATGGTCGGCGCCTACCAGGAGACCCTGGGCGACATCCACAACCTGTTCGGCGACACCGACGCGGTCAACGTGCGCGTCGAGGGCGACGGCTACGTGTTCGCCAACAAGCGTCGCGGCGACACCACCGACCTGATGCTCGACTACGTCGGCTACGACCTGGAGGCCTTGCGCGCCAGCTACCGCGCGCGCATTGCCGACGCGGGCGTCGCCGGCGACGAGGCGGCGCGCCTGTACGATGCGCTTGATGCCGGCCTCACCGCCTACACCTACCTCGCCGAAGACACCCACTGA
PROTEIN sequence
Length: 391
LKLQHFHMGSQISNVRDIANGMREATRYFVELSHMGVPLEIVDVGGGLGVDYEGTRSRSHNSINYSLEQYAATIVQSLAEAVSAEGLAAPHILTEAGRAMTAHHAVMVVNVTEVEQVPAGSMPSPRGDEPAVLRHLREVHAALDERPPLELFHEAQHHLAEGQSLYALGQLSLADRARLDEMFYAIANAVRGRLLPAERAHRQVLDELDEKLVDKYFTNFSVFESIPDVWAIDQVFPIMPIARLDEEPTRRGVIVDLTCDSDGRIDHYVEADGVDVSLPLHALKDGESYRLGIFMVGAYQETLGDIHNLFGDTDAVNVRVEGDGYVFANKRRGDTTDLMLDYVGYDLEALRASYRARIADAGVAGDEAARLYDALDAGLTAYTYLAEDTH*