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SCNpilot_cont_1000_bf_scaffold_20524_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(1..1722)

Top 3 Functional Annotations

Value Algorithm Source
Two component system sensor-response regulator hybrid protein (Fragment) n=1 Tax=Rhodanobacter denitrificans RepID=I4WEV5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 556.0
  • Bit_score: 743
  • Evalue 1.20e-211
Two component system sensor-response regulator hybrid protein {ECO:0000313|EMBL:EIM02461.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 565.0
  • Bit_score: 637
  • Evalue 2.20e-179
signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 559.0
  • Bit_score: 485
  • Evalue 1.80e-134

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1722
ATGCTCGCCGCCACGGACCCGATTTGGCATGATGGGGCGGATCAGGGGAATCTGCGCATGCTTGCATCGCTCATGTTGGGTGCGGTTCTGGCGGTGGCCACGCCGGGGTCCGCGGCCGCCGGCGGTGCCAGCACGACAATGCCGGCCGCCGGCGCGAGCATGCCGGCGACGCCGCAGTTCCGTCGTTATGGCGTGGCCGACGGCGTGCCCAGCGGTTCGATCTACGCGGTGGCGCAGGATCATCGCGGCATGATGTGGTTCGGTGCCGATGGCGGCCTGGTGCGCTTCGACGGCGTCACGTTCAAGGTGTTCCGGCATGCCAGCGGCGATCCGCTGTCGCTGCCGAGCAACCAGATCTACACCCTGTTCGTGGACAAGGCGGACCGCATCTGGGCCGGCGGCGTCTCGGCGGGACTGACCGTCTACGACCAGGACGGCGGGCGCTTTCGCCACTGGGCGCACGCAGCGGACGATCCGCACAGCCTCAGCAACGACGAAGTGTGGAGCATCGCGCAGACCCCCGATGGCCAGATCTGGGTGGGCACCCAGGGCGGCCTCGACCGCATGCGCCGCGACGAGAGAGGTTTCGAACCCGTGCGGCTCGATGCCGGCAGCGGGCAGGCGGCCCCGTTCGGCGCCATCCGCGCCTTGCTGGCCGACCACGAGGGGCGGTTGTGGATCGGCAGTGAGCATGGTCTCTACGTGCGCTCGACCGACGGCAAGGTGCGCCGCGTGGCGGTCGACCCCGCGTTCGCCGGCGACGTCGGCGCGGTGTGGCGCATCGAGGGCGATGGCGACGAGATCCGCGTGGCGGTCAGCGGTGGCCTGCTGGTGGTCGGCGCCGACGGCGTGGCGCGGCCGCTGGCAAATCGGCAACTGGCCAACACGCGCATCCTGAGCAGCGTGCGCGACAGCCAGGGGCGGTTGTGGCTGGGCAGCCTCGACGGCGTCTGGCTCGAATCGGAACAGGGCCCGCTGCAGCACATCACCGGCGCGCCGCTGTTGCCCGGCGGCCTGCCCAGCGATCGGCTGTGGCAGATTTTCCGCGATCGCGAAGGCGGCCTGTGGTTCACCTTCGACCAGTCCAGCATCGCGTACCTGCCGCCGAGCTGGAATGGTTTCGCGCGTTTCACGCATATCCCGGACGATGCCGACAGCCTGTCCAACACCGCCGCGCTGTCGGTGCTGACCGGGCGCGACCACGAGCTGTGGGTGGGCGGCTACAACGGCTGGGTCGACAAGCTGGATACGGCGACCGGCGAGGTCAGCCACGTGCTGCGCGGCCTGCACGGCAACCTCACCTCGCTGGCGGAGGATGCGCGCGGCCGCCTGTGGATCACCGGGCCCGGGCGCATCTACCGCTACGACCACGGCAAGCTGCTGACGCTGGGCGCCGAGCAGACGCACATGAAACGGCCGCTCGCGCTGGTCGCCGGCATGGACGGCCATATCTACGGGGCGTCGTGGGGCGAGGGCGTGTTCGCGATCGACCCCGACACGCTGGCGTCGACGCCGCTGCTGCCGGCCGATGCGCCCGACGGCGCGCGCTTCTTCGACCAGTTGCGGGCGCACGACGGGGCGGTCTGGTACGCCAGCATGGCCGGGCTGATGCGCAGCGAAGGGCCCGGACAGCCGCTGGCGTTCGTGCCGGGCGTGTCGCGGCGGGAGATCTACAGTTTCGCGTTCGATGACGACGGTTTCTGGATCGCCACCGAAACCGCG
PROTEIN sequence
Length: 574
MLAATDPIWHDGADQGNLRMLASLMLGAVLAVATPGSAAAGGASTTMPAAGASMPATPQFRRYGVADGVPSGSIYAVAQDHRGMMWFGADGGLVRFDGVTFKVFRHASGDPLSLPSNQIYTLFVDKADRIWAGGVSAGLTVYDQDGGRFRHWAHAADDPHSLSNDEVWSIAQTPDGQIWVGTQGGLDRMRRDERGFEPVRLDAGSGQAAPFGAIRALLADHEGRLWIGSEHGLYVRSTDGKVRRVAVDPAFAGDVGAVWRIEGDGDEIRVAVSGGLLVVGADGVARPLANRQLANTRILSSVRDSQGRLWLGSLDGVWLESEQGPLQHITGAPLLPGGLPSDRLWQIFRDREGGLWFTFDQSSIAYLPPSWNGFARFTHIPDDADSLSNTAALSVLTGRDHELWVGGYNGWVDKLDTATGEVSHVLRGLHGNLTSLAEDARGRLWITGPGRIYRYDHGKLLTLGAEQTHMKRPLALVAGMDGHIYGASWGEGVFAIDPDTLASTPLLPADAPDGARFFDQLRAHDGAVWYASMAGLMRSEGPGQPLAFVPGVSRREIYSFAFDDDGFWIATETA