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SCNpilot_cont_1000_bf_scaffold_21497_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(2..751)

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSB2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 195.0
  • Bit_score: 324
  • Evalue 1.30e-85
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 195.0
  • Bit_score: 324
  • Evalue 1.80e-85
penicillin-binding protein 1B similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 195.0
  • Bit_score: 321
  • Evalue 2.60e-85

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGCCCGCCGCCCGGAACGCCAAGGCATGCCCAAAACCGGCGGGCAGTGCCCGCCCTACCATCCACATGCCCGGGAATTGCCCGCAAAACCGCCGCGGCGTTCATGGGCGCGCCGGGATGCACGCCCTATCATCGGGAAACCTGATCGCCGGATTCCGCCGCCCTTGAGCTTCCTCGACCGTACCCGTTCCCTCGCCCGCCGCAGCTGGCCGTGGCTGCGCATTCCGTGCTGGATCGGCCTGGGCCTGCTGGTCGGTTTCGTGTTGCCGTACGTGCTGGTGCTCAATAAGCGCGTGCAGGATCGTTTCAACGACCTGGTGTTCGCGGTGCCCACGCGGGTGTATGCGCGGCCGCTGCCGCTGCAGGCCGGCGAGCCGATGACCAGCGCCGCGCTGGAACTGGAACTGACCTTCGCCGGCTACAGCCACGACGGCAAGGGCCAGGTGCCCGGCAGCTGGATGAAGCAGGGCAGCCGCTACACGATCTCCTCGCGTGGCTACGCCGGCCCCGACGGCGGCGAGTTGCCCAAGCGCATCGTGGTGACCCTGGGCGGCGGCGAGGTGGCCTCGGTGCACACCGCGGCGGACAAGCAGCCGATCAAGCAGACCCATCTCGACCCGGCGCGCATCGCCACGCTGTACGGCGCCAGCCAGGAGGAGCGACGCTTCGTGCAGTTGCGCGACGTGCCGCCGCTGCTGGTCAAGGGCCTGCAGTCGGTCGAGGACCGCAATTTCAAGAACAACATCGGC
PROTEIN sequence
Length: 250
MARRPERQGMPKTGGQCPPYHPHARELPAKPPRRSWARRDARPIIGKPDRRIPPPLSFLDRTRSLARRSWPWLRIPCWIGLGLLVGFVLPYVLVLNKRVQDRFNDLVFAVPTRVYARPLPLQAGEPMTSAALELELTFAGYSHDGKGQVPGSWMKQGSRYTISSRGYAGPDGGELPKRIVVTLGGGEVASVHTAADKQPIKQTHLDPARIATLYGASQEERRFVQLRDVPPLLVKGLQSVEDRNFKNNIG