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SCNpilot_cont_1000_bf_scaffold_30434_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(1163..1531)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDP9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 122.0
  • Bit_score: 243
  • Evalue 1.40e-61
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EIL97590.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 122.0
  • Bit_score: 243
  • Evalue 1.90e-61
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 122.0
  • Bit_score: 242
  • Evalue 5.70e-62

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GCGCTGAAGCAGCCGCGCGGCCTGCCGCGGCTGCGCGCGATCGTGGCGCACTGGTTCGAGTGGAGCCGCGAGCACCAGAGCGGCTGCGTGCTGCTGTCGGCCGTGAGCGAGTACGACGGCCGCGACGGTGCGCTGCACGACGGCGTGGTGCGGCAGCAGGCCGGCTGGCGCGACGAACTGCAGAAGGCGATCGCGCAGGCGGTGGAACTGGGCCACCTGCGCAGCGACACCGACGTCGCCCAGCTCGCCTTCGAGATCTACGCCCTGATGCTCGGCCTGCACCACGACGCCGGGCTGTTCGGATTCGACGAAGCCGGCCAGCGCACCCGCGCGGCCTTCGAGCGCCTGTGGCGCAGCTGGCAAACCTGA
PROTEIN sequence
Length: 123
ALKQPRGLPRLRAIVAHWFEWSREHQSGCVLLSAVSEYDGRDGALHDGVVRQQAGWRDELQKAIAQAVELGHLRSDTDVAQLAFEIYALMLGLHHDAGLFGFDEAGQRTRAAFERLWRSWQT*