ggKbase home page

SCNpilot_cont_1000_bf_scaffold_45804_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 3..1112

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 370.0
  • Bit_score: 701
  • Evalue 7.80e-199
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 370.0
  • Bit_score: 690
  • Evalue 2.40e-196
Ribonuclease R n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWR5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 370.0
  • Bit_score: 701
  • Evalue 5.60e-199

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
TCCACCTATTTCCCCGGCTTCGTGGTGCCGATGCTGCCGGAGACGCTGTCCAACGGCATCTGCTCGCTGAACCCGAAAGTGGATCGGCTGTGCATGGTCTGCGACATGGCGGTGAACGCCGATGGCGAGGTGACCCGGTCGAAGTTCTACGACGCGGTGATGCTGTCGCATGCACGGCTCACCTACGACAAGGTGTGGCAGGCGGTGGGCCTGCGCGACAAGGACGCGCGCCATGAAGTGGCCGACGTGCTGCCGCAGCTGGAGAACCTGCACGCGCTGTACAAGGCGATGGCCGCGCAGCGCAAGCGCCGCGGCGCGATCGACTTCGAGACGCCGGAAGTGAAGTTTCGCCTCGACCAGACCGGCAGCGTCGAGTCGATGGGCGCCACCGAACGCAACGACGCGCACAAGCTGATCGAGGAATGCATGATCGCCGCCAACGTGCAGGCGGCGCTGTTCCTGGAAAGGAAGAAGATCCCCGCGCTGTTCCGCGCGCACGAGCCGCCGCCGGCGGAAAAGTACGAGGACCTGCAGCAGTTCCTGCGCGAGTTCAAGCTGCGCATGCCATCGGTGGACGAGGTGACCCCGGCGGATTTCGCCGAGATCCTGACGCTGGTGCGCGACCGCCCCGAGCGCGAGCTGATCCAGAGCGTGCTGCTGCGCTCGCAGAGCATGGCTGCCTACCAGCCGGACAACCGCGGCCACTTCGGCCTGGCCCTTTCGGCTTACGCGCACTTCACCTCGCCGATCCGGCGTTACCCGGACCTGCTGGTGCACCGTGCGATCCGCTATGCGCTGACCGGCGGCAAGCCGGCGGACTACACCTATACCTCCGCCGAGATGGCGGCGATGGCCGTGCACTGCTCGCAGCGCGAGCGCCGTGCCGAGGAGGCCGAGCGCGACGTGGACGAGCGCTTCAAGTGCGCGTGGATGGCCAAGCACGTGGGCGAGGAGTTCGACGGCGTGGTCACCGGCGTCACCTCGTTCGGCCTGTTCGTGGAACTGGACGAATCGAAAGTCTCCGGCCTGGTACACATCAGCCAGCTGGTGAACGACTACTACCACTTCGACGCGGTGCGCAAGCTGCTCAAGGGTGAGCGCACCGGCGCG
PROTEIN sequence
Length: 370
STYFPGFVVPMLPETLSNGICSLNPKVDRLCMVCDMAVNADGEVTRSKFYDAVMLSHARLTYDKVWQAVGLRDKDARHEVADVLPQLENLHALYKAMAAQRKRRGAIDFETPEVKFRLDQTGSVESMGATERNDAHKLIEECMIAANVQAALFLERKKIPALFRAHEPPPAEKYEDLQQFLREFKLRMPSVDEVTPADFAEILTLVRDRPERELIQSVLLRSQSMAAYQPDNRGHFGLALSAYAHFTSPIRRYPDLLVHRAIRYALTGGKPADYTYTSAEMAAMAVHCSQRERRAEEAERDVDERFKCAWMAKHVGEEFDGVVTGVTSFGLFVELDESKVSGLVHISQLVNDYYHFDAVRKLLKGERTGA