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SCNpilot_cont_1000_bf_scaffold_50286_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 3..1016

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus secretin PilQ/competence protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHM4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 339.0
  • Bit_score: 570
  • Evalue 1.00e-159
type IV pilus secretin PilQ/competence protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 339.0
  • Bit_score: 570
  • Evalue 3.30e-160
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 338.0
  • Bit_score: 580
  • Evalue 1.40e-162

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
GTGCGGGGCCGAGTCATGCGCCATGCGAGCCGTTACTTCCTGATGGGCCTGCTGATCGTCGGTGCCACCTGGGCCAGTGCCGCCATCGCGGCCACCACCACGCTGAAGAACATCAGCTACGACGCCTTGCCAGGCGGCAGCGTCCAGCTGCACCTGAACTTCGGCGACGGCCCGGTGCCGGAGCCGAAGATCTTCACCACGGACAATCCGCCGCGCATCGCGGTCGACCTGCCCGATACGACCAATGCCGCCGGGCGGCACATGGACATCGGCAAGGGTTCGACCTCCGGCGTCTCGGCAGTGTCTGCCGGTGGGCGCACCCGAGTGGTGGTCGAGCTGATGCGCGCGTCGAGCTACCGCGCCAGCGTCGATGGCAACAGCCTGGTGTTGACGATCAACAACGGCACCGCCGACCAGGCGGTCACCACCGCCTCCACGATCGACCCGACCAAGCGGCTGCCGTCGTCCTCCGATGGCCCGGCGATCTCCAACATCGACTTCCGTCGCGGCCCGAACGGCGAGGGCCGCGTGCTGGTCAGCTTCAGCGGCAGCGGCGCGCAGCCGGAAATGACCCGTCAGGGCGACAAGGTGGTGGTCACCATCGATCACGCCAACCTGCCGGCCAACCTCGCGCAGCGCCTGGATACGCTGGACTTCGCCACCCCGGTGCAGTCGATCACCAGCCGCGTCGGCAACGGCGGCGGCGCGCGCATCGAGATCGACACCAAGGGGACGGTCGAGACCTCGGCCTACCAGACCCCCGACCAGTACGTGGTCGAGGTGGCACCGAAGAAGGCCGCCGCCAAGGATGAGCGCCTGGCCAAGCTGGACGCGCAGCCCAATTACAACGGCAAGCGCGTCACCTTCAACTTCCAGGACATCCCGGTGCGCTCGGCGTTGCAGCTGATCGCCGATATCTCCGGGCTCAACCTGGTCGCCTCCGACAGCGTCGGCGGCAGCGTCACCCTGCGCCTGGTCAACGTGCCGTGGGATCAGGCGCTGGACGTGATCCTG
PROTEIN sequence
Length: 338
VRGRVMRHASRYFLMGLLIVGATWASAAIAATTTLKNISYDALPGGSVQLHLNFGDGPVPEPKIFTTDNPPRIAVDLPDTTNAAGRHMDIGKGSTSGVSAVSAGGRTRVVVELMRASSYRASVDGNSLVLTINNGTADQAVTTASTIDPTKRLPSSSDGPAISNIDFRRGPNGEGRVLVSFSGSGAQPEMTRQGDKVVVTIDHANLPANLAQRLDTLDFATPVQSITSRVGNGGGARIEIDTKGTVETSAYQTPDQYVVEVAPKKAAAKDERLAKLDAQPNYNGKRVTFNFQDIPVRSALQLIADISGLNLVASDSVGGSVTLRLVNVPWDQALDVIL