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SCNpilot_cont_1000_p_scaffold_44_23

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(23443..24135)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Janthinobacterium lividum RepID=UPI0002892686 similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 231.0
  • Bit_score: 290
  • Evalue 1.90e-75
Transcriptional regulator {ECO:0000313|EMBL:KHA78635.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 232.0
  • Bit_score: 300
  • Evalue 2.50e-78
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 223.0
  • Bit_score: 246
  • Evalue 9.60e-63

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Taxonomy

Janthinobacterium lividum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGCGTGACGTGATCCTGCTCGAAGACGAAGCCGTGCTGCGCGAGGAGCTGAGCGAGTTCCTCGCCGGCAACGGCTACCGCGTCGACGCCGAGGCTTCGCTGGAAGGCTTCAGGCGCAGCTACGACCCGGCGCGCCACGGTATCGCGCTGGTAGACCTGGGGCTGCCCGACGGCGACGGGCTGGTGCTGATCCGCGAATTGCGCGAACGCGGCGAGCGGCTGGGCATCGTGGTGCTGACCGCGCGCGGCGGTGCCCGCGACCGCGTGACGGGGCTGGACATCGGCGCGGACTACTACCTTTCCAAGACCTCTGACCTGGACGAGCTCGCAGCCACGCTGGCCGCGCTGTCCCGGCGCCTGGGCGACTCGCCCGCCGCGGTGCCGGCCGATGCCTGGGTGCTGGAACTGGGGCCGCGCCGACTGTCGCCGCCGGGATTCGCGCCGATCGCGCTGTCGGAGCAAGACCTGACGGTGCTGCACGAGCTGATGCGCAGCGCCGGCGAAATCGCCAGCCGCCAGCAGATCGTGCAGGCCCTGGGCGAGCATTACCTGAGCTACGACCAGCGCCGCCTCGACACGCAGATCCGCCGGCTGCGGCGCAAGGTCAGCGAGGCCACCGGGCTGGCGCTGCCGATCAACACGGCGCGCAATGCCGGCTACCGCTTCCATGCCAGGGCGTTGATCCGGCGCTAA
PROTEIN sequence
Length: 231
MRDVILLEDEAVLREELSEFLAGNGYRVDAEASLEGFRRSYDPARHGIALVDLGLPDGDGLVLIRELRERGERLGIVVLTARGGARDRVTGLDIGADYYLSKTSDLDELAATLAALSRRLGDSPAAVPADAWVLELGPRRLSPPGFAPIALSEQDLTVLHELMRSAGEIASRQQIVQALGEHYLSYDQRRLDTQIRRLRRKVSEATGLALPINTARNAGYRFHARALIRR*